KEGG   Sciurus carolinensis (gray squirrel): 124969457
Entry
124969457         CDS       T08117                                 
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncar03009]
    124969457
Ribosome biogenesis [BR:ncar03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    124969457
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WDR18_C WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_Vps41 WDR54 Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 124969457
NCBI-ProteinID: XP_047388361
LinkDB
Position
17:189165..199549
AA seq 453 aa
MLQGPRLAGGDTLPGQWRCGKMAAPMEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQA
GPRGLALLNGEYLLAAQLGKNYISAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVVAGI
AESIYLWEVSTGNLLVILNRHYQDVSCLKFTGDSSHFLSGGRDCLVLTWSLCSVLQVDPS
RIPAPRHVWSQHTLPITDLHCGFGGPLARVATASLDQTVKLWEISSGELLLSILFDVGIM
AVTMDLAEHHMFCGGSDGSIFQVDLCARPTQRERSFQPEQDPGKVFKGHRNQVTCLSVST
DGSVLLSGSHDETVRLWDVQSKQCIRTVALRGPVTNASILLAPVGMLSSDFRPSLPLPRF
NKHLLGAEHGDEPRGGGLPLRLGRHRQGMEPSYLDRMEQLHKVMCSTLEKNVLGGQDQLR
VRVTELEDEVRNLRKVNRDLFDFSTRIITRPAK
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgctccaaggtccgcgtctcgctgggggtgacacgcttccggggcagtggcggtgtggc
aagatggcggcgcccatggaggtggccgtgtgtacggattcggcggcgcagctgtggagc
tgcgtggtgtgggagctgcactcgggcgccaacctgctcacctaccgcggcggccaagct
gggcctcgcggcctggcgttgctcaatggcgagtacctcctggcggctcagctgggcaag
aactacatcagcgcctgggagctgcagcggaaggatcagctccagcaaaagatcatgtgc
cccggacctgtcacctgtctgaccacatcacccaatggcctctacgttgtggcgggaatt
gcagaaagtatatatctgtgggaggtctccacggggaacctcttggtcatcctgaaccgc
cactaccaggatgtctcgtgcctgaagttcacgggggacagcagtcacttcctctcaggg
ggcagggactgcctggtgctgacttggagcctctgcagcgtgctgcaggtggacccctcc
agaatcccagccccccggcacgtctggtctcaacacacgctccccatcacagacctgcac
tgcggctttgggggcccactggcccgggtggccaccgcctcgctggaccagacagtgaag
ctgtgggagatctcctctggtgagctgctgctgtccatcctgtttgatgtgggcatcatg
gccgtgaccatggacctggcagaacaccacatgttctgtggtggcagtgatggctccata
ttccaagtggacctctgtgctcggcccacacagagggagaggagcttccagccagagcag
gaccctgggaaggtcttcaaagggcacaggaaccaggtgacctgcctgtccgtgtccact
gatggcagcgtgctgctctcgggctcccatgacgagacagtgcgtctctgggacgttcag
agcaagcagtgcatccgtaccgtggccctcagaggcccggtgaccaacgcgtccatcctg
ctggcgccagttggcatgctgagctccgacttcaggcccagcctgccgctgccccgcttc
aacaagcacctgctgggcgccgagcatggggacgagcctcgtggagggggcctccccctg
cgcctgggccgccaccggcagggtatggagcccagctacctggaccgcatggagcagctg
cacaaagtcatgtgcagcaccctggagaagaacgtgctgggcggccaggaccagctgcgc
gtgcgcgtgacggagctggaggacgaggtgcgcaatctgcgcaaggtcaaccgtgacctc
tttgacttctccacgcgcatcatcacgcgacccgccaagtga

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