Sciurus carolinensis (gray squirrel): 124969501
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Entry
124969501 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT4-A-like
KO
K15171
transcription elongation factor SPT4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124969501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124969501
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124969501
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124969501
RNA polymerase I system
124969501
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
124969501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
124969501
NCBI-ProteinID:
XP_047388426
LinkDB
All DBs
Position
17:46979118..46979505
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AA seq
110 aa
AA seq
DB search
MALETVPKDLRHLXACLLCXFQYDGCDNCDAYPQMKGNREMVYDCTSSSFDGIIAMMSPE
DSWVSKWQRVSNFKTGVYAVPVTGHLPQGIVRELKSRGVAYKSRDTAIKT
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atggccttggagactgtgcctaaggacctgcggcatctgtgagcttgtctgctgtgtnng
tttcaatatgatggttgtgataattgtgatgcatacccacaaatgaagggtaatcgagag
atggtatatgactgcactagctcttcctttgatggaatcattgcaatgatgagtccagag
gatagctgggtctccaagtggcagcgagtcagtaactttaagacaggtgtatatgcagtg
ccagtcactggtcacctgccccaaggaatcgtgcgggaactgaaaagtcgaggagtggcc
tacaaatccagagacacggcaataaagacctag
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