Sciurus carolinensis (gray squirrel): 124969847
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Entry
124969847 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ncar04054
]
124969847
Pattern recognition receptors [BR:
ncar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124969847
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
LRR_8
AAA_16
AAA_19
LRR_12
Motif
Other DBs
NCBI-GeneID:
124969847
NCBI-ProteinID:
XP_047388757
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All DBs
Position
18:38717394..38740679
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AA seq
1065 aa
AA seq
DB search
MRKQEVRTGGAASQAYGTSSPAEQVKALVDLLAWKGSQGGQTPQVPDRLPDSPLSHHSND
SRIRRYREALLRRMEVVQNXAGPSHRLASLLXVEGLTDLQLTEHDFTQVEAHAGAGALLG
PIGLDRLFLPLSRVSIPPRISITVGVAGMGKTTLVRHFVRLWAQGQLGKNFLLVLPLTFR
DLNVHEKLSADRLLCSVFPNIGEAGLDVAAPGRVLLVLDGLDECKTPLDFSNTVACTDPK
KEIQVDHLITNIVRGNLFPEVSVWITSRPSVAGQIPGGLVDRMTELRGFTEEEIKVCLER
MFPEEQTLLDQVLSRVQADRALYLMCTVPAFCSLTGVALGHSYRSRPTLQDAELWPPRTL
CELYSWYFRMALVREGQEKGKVSPRLEQVAHSGRKMVGTLGRLAFHGLVKRKYVFYEQDM
KAFGVDLTLLQSALCSCFLQREETLASSVAYCFTHLSLQEFVAAAYYYSASRRAIFDLFT
ESGMSWPRLGFLTHFRSAAQRAMQAEDGRLDVFLRFLSGLLSPRVNALLAGSLLGQGEHQ
GCRAQVAELLQGCLQPDTAVCARAINVLHCLNELQHTELACSVEEAMESGALARLTSPSH
RAALAYLLQVSDTCSHEANLSLCLSQSVLQSLLPQLLYCRSLRLDTNQFRDPVMELLGSV
LSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTALDLRSNTIGPQGAKALAEALKI
NRTLTSLSLQSNMIKDDGARSMAEALASNQTLSLLHLQKNSIGPSGAQRMAEALRHNRSL
KELMFSSNSIGDGGATALAEALKVNQGLESLDLQSNSISDAGVAMLMGALGVNQTLLSLN
LRENSISPEGAQALAHALCINGTLKHLDLTANLLHDQGAQAIAVAVGRNHALTSLHLQWN
FIQASAARALGQALLLNNSLTSLDLQENAIGDEGASAVASALKANTVLTALYLQAASIGA
PGAQALGEALAVNRTLEILDLRGNTIGVAGAKALASALKINSSLRRLNLQENSLGMDGAI
CIATALSGNHGLQHINLQGNQVGDSGARMISEAIKTKAPSCTVEM
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcaggaggtacggacaggcggggcggccagccaggcctacggcaccagctcc
ccagctgagcaggtgaaagcccttgtggacctgctggcctggaagggcagtcagggtggt
cagaccccacaggttcctgacaggctgccagactccccactgagccaccacagcaatgac
tcaaggatccggaggtaccgtgaggccctgctgagaaggatggaggtggtccagaactga
gcaggcccctcacaccggctggccagcctcctgnctgtggagggcctgacagacctgcag
ctgacagagcatgacttcacacaagtggaggcacacgcgggggccggcgccctgctcggc
ccaattgggctggacaggctcttcctgcctctgtcccgggtatccatcccaccccgaatt
tccatcactgtcggggtggctggcatggggaagaccaccctggtgaggcactttgtccgc
ctctgggcccaggggcagctgggcaagaactttttgctggtactgcccttgaccttccgg
gatctcaatgtccatgagaagctatctgcagacagactcctctgttctgtctttccaaac
attggggaggctggtctggatgtggcagccccaggaagagtcctcctggtcctggacggc
ttggacgagtgtaaaacacctctggacttctccaacactgtggcctgtacagaccccaag
aaggagatccaggtggaccatctgatcaccaacattgtccgaggcaacctctttccagaa
gtttctgtttggattacctcccgtcccagtgtggctggccagatcccagggggcctggtg
gaccggatgactgagctccgaggcttcactgaggaggagatcaaggtgtgtctggagcgg
atgttccctgaggagcagactcttctggaccaggtcttgagccgggtgcaggctgacagg
gcgctgtacctgatgtgcaccgtcccagccttctgcagcctcacaggggtggcgctgggc
cactcgtatcgcagcaggcctacactccaggatgcagagctgtggcctccacggaccctg
tgtgagctctactcttggtactttagaatggccctcgtcagggaagggcaggaaaagggc
aaggtgagccctcggctcgagcaggtagcccacagtggtcgcaagatggtggggacgctg
ggccggctggccttccatgggctggtcaagaggaagtacgtgttttatgagcaagacatg
aaggcatttggtgtggacctcactctgctgcagagcgccctgtgtagctgctttctgcag
cgggaggagacgctggcttcctcagtggcctactgcttcacccacctgtcactgcaggag
tttgtggcagctgcgtattactacagtgcctccaggagagccatctttgacctctttact
gagagcggcatgtcctggcccaggctgggcttccttacacatttcaggagtgcagcccag
cgggccatgcaggctgaggacgggagactagacgtgttcctgcgcttcctctctggcctc
ttgtctccaagggttaatgccctgctggctggctccctgctgggccagggcgagcaccag
ggctgcagggcccaggtggctgagctcctgcagggctgcctgcagcctgacactgcagtc
tgtgcccgtgccatcaacgtcctgcactgcctgaatgagctgcagcatacggagctggcc
tgcagcgtggaggaggccatggagagtggggcccttgccaggctgaccagcccttcacac
cgtgctgccttggcctatctcctgcaggtgtctgacacctgcagtcatgaggccaacctg
tccctgtgcctcagccagagtgtcctccagagcctactgccccagctgctctactgccgg
agcctcaggctggacaccaaccagttccgggaccccgtgatggagttgctaggcagcgtg
ctgagtgggaaggactgtcgcattcagaagatcagcctggctgagaaccagatcagtaac
aaaggggccaaagctctggccagatccctcctggtcaacagaagtctgacggctctggac
ctccgcagtaataccattggaccacagggggccaaggcgctggctgaagctctgaagatt
aaccgcactctgacctctctgagcctccaaagcaacatgatcaaggacgatggtgctagg
tccatggctgaggccttggcctccaaccagaccctctccctgctgcacctgcagaagaat
agcatcgggccctcaggagcccagcggatggcagaggccttgaggcacaataggagtctg
aaggagctcatgttctccagtaacagcattggtgatggaggtgccacggccctagccgag
gccctgaaggtgaaccagggcctggagagcctggacctgcagagcaactccatcagtgat
gcgggagtggccatgctgatgggggcccttggtgtcaaccagaccctcctcagcctcaac
cttcgagaaaactccattagtcctgagggagcccaggccttggctcatgctctctgcatc
aacggcactttgaagcacctagacctgacagccaacctcctccatgatcagggtgcccag
gccattgcagtggcagtgggaagaaaccacgccctcacgtcccttcacctgcagtggaac
ttcatccaggccagtgctgccagggccctgggacaagcacttctgctcaacaacagcctg
accagcttagacttacaggagaatgccattggggatgaaggagcttctgcagtggccagt
gcactaaaggcaaacacagtcctcactgctctctacctccaggcagcctccattggtgca
ccaggggcccaggcgctgggggaagccctggctgtgaacagaacactggagattcttgat
ttaagaggaaacaccattggggtggcaggagccaaggccctggccagtgcactgaagatt
aactccagtctccgacggctcaatcttcaagagaactccttggggatggatggggccata
tgcattgccactgctctgtctgggaaccatgggctgcagcacatcaatctccagggaaat
caagttggggactctggtgccaggatgatctcagaagctatcaagaccaaagctccctca
tgcactgtggaaatgtaa
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