Sciurus carolinensis (gray squirrel): 124969890
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Entry
124969890 CDS
T08117
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1 isoform X1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124969890
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124969890
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
WD40
LRR_8
WD40_CDC20-Fz
WD40_Prp19
WD40_RFWD3
LRR_1
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
LRR_14
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
124969890
NCBI-ProteinID:
XP_047388845
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All DBs
Position
18:complement(6443323..6449532)
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AA seq
651 aa
AA seq
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MGPLTARLLMQRGRPKSDRLGKIRSLDLSGLKLLSQHLDPKLLSRLKQLQELDLSNNQLE
TLPANLGLSHLRILRCANNQLGDVTALCQFPQLEELSLEGNPFLTVSDNLKVSFLLPKLR
KVNGKDASSTCTQVENLNRELTHRVTAHWEKFMAALGPGEEAEKAQADFVRSAVRDVRYG
PESLREFTQWRVRMISEELVASGRTQVHEADFPKTPLETTATYKPRARLVALKRPDEVPP
NLPSTKRACTSPSPSAQMEDGPAGPAGGQPALQLEPLHFLQCHSRNNSPQDLKTQLWACA
FEPAWEEGHSGATSQTVATCGGEAVCVIDCQTGIVLHKYKAPGEEFFSVAWTALMVVTQA
GHKKRWSVLAAAGLRGLVRLLHVRAGFCCGVIRAHKKAIATLCFSPTHETHLFTASYDKR
IILWDIGVPNHDYEFQASQLLTLDSASIPLRLCPVASCPDAYLLAGCEGGCCCWDVRLDQ
PQKRRACEVEFVFATGSEASGRRVDGLAFVNEDVVASKGSGLGTICLWSWSQTWLGRGSQ
SPLAVVVLARLQWSSTELAYFSLSTCPDKGIVLCGDEEGSVWIYDVRHILKQPPPQLAAP
QAPVQILKWPQPLALGQPVTKTMVNTVVANAALTYLTALTDSNIVAIWRRC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccttacggcgcggctgctcatgcagcgcgggcgacccaagagcgaccggttg
gggaagatccggagcctggacctgtcagggctgaagctgctctctcagcacctggacccg
aagctcctgagccgcctgaagcagctgcaggagctcgacctctccaacaaccagctggag
acgctgccggccaacctgggcctgtcccacctgcgcatcctccgctgtgccaacaaccag
ctgggggatgtcactgccttgtgccagttcccgcagctcgaggagcttagcctggagggc
aaccccttcctgacggtcagtgacaacctcaaagtctcctttctcctgcccaagctacgt
aaggtcaatggcaaggatgcgtcttcgacctgcactcaggtggagaacctgaaccgggaa
ctgacccacagggtcacagctcactgggagaagttcatggctgcactgggccctggagag
gaggctgagaaagcccaggcagacttcgtgaggtccgccgtcagggatgtgcgctatgga
cccgaatccctccgcgagttcacccagtggcgagtgcggatgatctctgaggagttggta
gcctccggtaggacccaggtgcatgaggcagacttcccaaagacgcccctggaaaccaca
gctacctacaagcccagggccaggctggtggccttgaaacggccggatgaggtcccaccc
aacctcccctcaaccaagcgggcttgtacctccccgtccccgtcggcgcagatggaggac
ggccccgcgggtcctgcgggcggccagcctgccctgcagctggagcccctgcacttcctg
cagtgccacagcaggaacaacagcccccaggacctgaagacccagctgtgggcctgtgcc
ttcgagccagcctgggaggaggggcactcgggggccacctcccagactgtggccacctgt
ggcggggaggcggtttgcgtgatagactgccagacgggcatcgtgctccacaagtacaag
gcgcctggtgaggagttcttctcagtggcctggacagccctgatggtggtcacacaggca
ggccacaagaagcgctggagcgtgctggcggctgcaggcctgcggggcctggtccggctg
ctgcacgtgcgggcgggtttctgctgtggagtcatccgggcacacaagaaggccatcgcc
accctctgcttcagtcccacccacgagacccacctgttcacggcctcctatgacaagcgg
atcatcctctgggacattggggtgcccaaccatgactatgagttccaggccagccagctg
ctcacactggactccgcctccatccccctgcgcctctgccccgtcgcctcctgcccggat
gcctacctgctggctggctgtgagggcggctgctgctgctgggacgtgcggctggaccag
ccccaaaagaggagggcatgcgaggttgagtttgtctttgccaccggctccgaggcatct
gggcggagagtggacgggctggcatttgtgaatgaggacgttgtggcctccaagggaagt
ggcctgggcaccatctgcctgtggagctggagccagacgtggctgggccggggcagccag
tccccactggctgtggtggtcctggcccggctgcagtggtcatccacggagctggcctac
ttctcgctcagcacctgccccgacaaggggatcgtgctctgtggggacgaggagggcagc
gtgtggatctacgatgtcaggcacatcctgaagcagccacctccacagctggcagcccca
caggccccggtgcagatccttaagtggcctcagcccttggcgcttggccagccggtgacc
aagaccatggtgaacactgtggtggccaatgctgccttgacctacctcaccgctctgacg
gactccaacatcgtagccatctggaggagatgttag
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