Sciurus carolinensis (gray squirrel): 124969894
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Entry
124969894 CDS
T08117
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03020
RNA polymerase
ncar03420
Nucleotide excision repair
ncar05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124969894
09124 Replication and repair
03420 Nucleotide excision repair
124969894
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
124969894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124969894
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124969894
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124969894
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124969894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
124969894
NCBI-ProteinID:
XP_047388854
LinkDB
All DBs
Position
18:6439280..6443098
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctccggccttcgagtcgttcttgctcttcgagggcgagaagaagatcacc
attaacaaggacaccaaggtgcccaatgcctgtttgttcaccatcaacaaagaagaccac
acactaggaaacatcattaaatcgcagctgctgaaggatccacaggtgctgtttgctggc
tacaaagtcccccatcccttggagcacaagatcatcatccgtgtgcagaccaccccggac
tacagcccccaggaggccttcaccaacgccatcacggacctcatcagtgagctctccctg
ctggaggagcgcttccgggtggccatcaaagacaagcaagaggggattgagtag
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