Sciurus carolinensis (gray squirrel): 124969903
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Entry
124969903 CDS
T08117
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124969903
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124969903
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124969903
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Atypical E3
124969903
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
124969903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
C1_1
zf-RING_2
AbiJ_NTD3
BORCS8
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
124969903
NCBI-ProteinID:
XP_047388866
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All DBs
Position
18:21520610..21547847
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AA seq
266 aa
AA seq
DB search
MQGSTKRMGIMTDVHRRFLQLLMTHGVLEEWDVKRLQKHCYKVHDSNATVEKLEDFINNI
NSVLESLYIEIKKGVTEDDGRPIYALVNLATTSISKMATDFAENELDLFRKALELIIDSE
TGFASSTNILNLVDQLKGKKMRKKEAEHVLQKFVQSKWLIEKEGEFTLHGRAILEMEQYI
RETYPDAVKVCNICHGLLIQGQSCETCGIRMHLPCVAKYFQSNPEPRCPHCNDYWPHEIP
EVFNPEKEREAGVSKSSKKSLRSRQH
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaagcacgaaaagaatgggcatcatgactgatgtccatcgacggttcctccag
ttgcttatgactcatggcgtgctagaggaatgggatgttaagcgcttgcagaagcactgc
tacaaggtccatgacagcaatgctaccgtagagaagttggaggacttcatcaacaacatt
aacagcgtcttggagtccttgtacatcgagatcaagaaaggagtcacggaagatgacggg
cggcccatttatgcgctggtcaatcttgctacaacttcgatttcgaaaatggccacagat
tttgcagagaatgaactagatctgtttagaaaggccttggaactgattattgactcggaa
actggttttgcatcttccacaaacattttgaacctggttgatcaactgaaaggcaagaag
atgaggaagaaggaagccgagcatgtgctgcagaagtttgttcagagcaagtggctgatc
gagaaagaaggggagttcactctgcacggccgggccatcctggagatggagcagtacatc
cgggagacctaccccgatgccgtgaaggtctgcaacatctgccacggcctcctcatccag
ggtcagagctgtgagacctgtggcatcaggatgcacttgccttgcgtggctaagtacttc
cagtccaaccctgagccgcgctgtccccactgtaatgactactggccccatgagatacca
gaggtcttcaaccctgagaaggagagggaagctggcgtctccaaatccagcaaaaagtcc
ttgcggtccaggcagcattag
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