Sciurus carolinensis (gray squirrel): 124969984
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Entry
124969984 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124969984
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124969984
Surveillance factors
Other surveillance factors
124969984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
PRTase_3
Motif
Other DBs
NCBI-GeneID:
124969984
NCBI-ProteinID:
XP_047388939
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All DBs
Position
18:7737149..7750337
Genome browser
AA seq
1035 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLADYRYGREEMLALYVKENKVPEEL
QDKEFAAVLQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGAGPPLAGTSRGRGS
TRSRGRGRGDSCFYQRSIEEGDGAFGRNPREIQRSQSWDDRGERRFEKSTRRDGARSAFE
EGGAGPRKEHARSDSENWRSLREEQEEEEEGSWRLGAGPRRDGDRWRSTSPDGGPRSAGW
REHGXRRRKFEFDLRGERGGCGEEEGRGGGGSSHLRRCRGPDGFDDDKDGLPEWCLDDED
EEMGTFDASGAFLPLKKGPKEPIPEEQELDFQGLEDEEEEPSEGLDEEGPEAGGKELTPL
PPQEEKSSSPSPLPTLGPLWGTNGNSEETMEKELPTAEGDELRGVQLSPGVTSPPAPPGD
LEDEEGLKHLQQEAEKLVASLQDSSLEEEQFTAAMQTQGLRHSTAATALPLSHGAARKWF
YKDPQGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGFQPLGEVIKMWGRVPFAPGPS
PPPLLGNMDQERLKKQQELAAAALYQQLQHQQFLQLVGSRQLPQCALREKAAMGDLTPPQ
QQQLTTFLQQLQALKPPRGGDQNLLPTMSRSLSVPDSGSLWDVHTSASSQSGGEASLWDI
PINSSTQGPILEQLQLQHKFQERREVELRAKREEEERKRREEKRRQQQQEEQKRRQEEEE
LFRRKQVRQQELLLKLLQQQQAAAAVPVPPAPSSPPPLWAGLAKQGLSMKTLLELQLEGE
RQLHKQSAPREPPRAQAPNHRVLGGLGTGPLNQWVSEAGPLWGGPDKSGSSGGSSLGLWE
DTLKNSGSLARSLGLKNSRSSPSLSDSYSHLSGRPVRKKTEEEEKLLKLLQGIPRPQDGF
TQWCEQMLHTLSTTGSLDVPMAVAILKEVESPYDVHDYIRSCLGDTLEAKEFAKQFLERR
AKQKASQQRQQQQQQEAWLSSASLQTAFQANHSTKLGPGEGSKAKRRALMLHSDPSILGY
SLHGPSGEIESVDDY
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggagacactcaactttgggcctgagtggctgagggccctttccagtggaggc
agcgtggcctccccacccccatcccctgccatgcccaaatacaagctggctgactaccgc
tacgggcgagaggagatgttggccctctatgtcaaggagaacaaggtccctgaggaactg
caggacaaagagtttgctgcggtgttacaggaggagccactgcagcccctggccctggag
cctctgactgaggaggagcagagaaacttctccctgtcagtgaacagtgtggctgtgctg
aggctgatggggaaaggggctggcccccccctggctggcacctcccgtggcaggggcagc
acgcggagccgaggccgtggccgtggtgacagttgcttttaccaaagaagcattgaagaa
ggtgatggggccttcggacggaatccccgggagatccagcgaagccagagctgggatgac
agaggcgagaggcggtttgagaagtcgacaaggagggatggagcccgttctgcattcgag
gagggcggggctggcccaaggaaggagcacgctcgctcagatagtgagaactggcgttcc
ctgcgagaggagcaggaagaggaggaggagggcagctggagactaggggcaggaccccgg
cgagatggcgatcgctggcgctccaccagccctgatggcggtccccgctctgctggctgg
cgggaacatgggnaacgtcgtagaaagtttgaattcgatttgcgaggggagcgaggaggg
tgtggtgaagaggaggggcggggtgggggaggcagctctcacctccggaggtgccgcgga
cctgatggctttgatgacgacaaggatgggctcccggagtggtgcctggatgatgaggat
gaagaaatgggcaccttcgatgcctccggggccttcttgcctctcaagaagggccccaag
gaacctattccagaggagcaggagctcgatttccagggcctggaggacgaggaggaagag
ccttcagaagggttggatgaggagggacctgaggcaggtgggaaggaactaaccccactg
cctcctcaggaggagaagtccagttccccatccccactgcccaccttgggcccactctgg
gggacgaatgggaacagtgaggaaactatggagaaagagctccccacagctgaaggagat
gagctgaggggagttcaactgagtcctggggtgacctcaccccctgctccacctggagat
ctggaggatgaagaaggcttgaagcatctgcagcaggaggcagaaaagctggtggcctcc
ttgcaggacagttctctggaggaggagcagttcacggctgccatgcagacccagggcctg
cgccactccacagctgccactgccctccccctcagccatggcgctgcccgaaagtggttc
tacaaggacccacaaggggagatccaaggcccctttacaacccaggagatggcagagtgg
ttccaggctggctacttctccatgtcgctgctggtgaagcggggctgtgatgagggcttc
cagcccctaggagaggtgatcaagatgtggggccgtgtgccctttgcccctgggccctcc
ccacccccactgctgggaaacatggaccaggagcgcctgaagaagcaacaggagctggcc
gccgcggctttgtaccagcagctgcagcaccagcagtttcttcagctggtcggcagccgc
cagctcccacagtgcgcactccgggaaaaggcagctatgggggacctgacgccgccgcag
cagcagcagctcacaacattcctgcagcagctccaggctctcaaaccccccagaggtggg
gaccagaacctgctcccgacgatgagccggtccttgtcggtgccagattcaggctccctc
tgggatgtacatacctcagcctcatcacagtcaggtggtgaggccagtctttgggacata
ccaattaactcttcgactcagggtccaattctagaacaactccagctgcaacataaattc
caggagcgcagagaagtggagctcagggcgaagcgggaggaggaggaacgaaagcgccgc
gaggagaagcgccgccagcagcagcaagaggagcagaagcggaggcaagaggaggaggag
ctcttccgaaggaagcaggtgcggcagcaggaactcttgctgaagctgctgcagcagcaa
caagccgcagccgctgtccctgtgccccctgcgcccagctccccacccccactctgggct
ggcctggccaagcagggcctgtccatgaagaccctgctggagctacagctggaaggagag
aggcagctgcacaagcagtctgcaccccgggagccaccacgggcccaggcccccaaccac
cgtgtgcttgggggtctgggcactggccccctgaaccagtgggtgtccgaggccgggcca
ctgtggggcgggccagacaagagtggaagcagtggtggcagcagcttggggttgtgggag
gacaccctcaagaacagcgggagcctggcccgtagcctcggcctgaagaacagccggagc
agcccctctctcagcgactcatatagccacctgtcaggtcggcctgttcgcaaaaagaca
gaggaagaagaaaagctgctgaagctactgcagggcatccccaggccccaagacggcttc
acccagtggtgtgagcagatgctgcacaccctgagcaccacgggcagcctggacgtgccc
atggctgtagcgatcctcaaggaggtggaatccccctatgatgtccacgactatatccgt
tcctgtctgggggacacgctggaagccaaagaatttgccaaacaattcctggagcggagg
gccaagcagaaagccagccagcagcggcagcaacagcagcagcaggaggcgtggctgagc
agtgcctctctgcagacagcctttcaggccaaccacagcaccaaactcggccctggggag
ggcagcaaggccaagaggcgggcgctgatgctgcactcggaccccagcatcttggggtac
tccctgcatggaccttctggtgagatcgagagcgtggatgactactga
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