Sciurus carolinensis (gray squirrel): 124970029
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Entry
124970029 CDS
T08117
Name
(RefSeq) protein CLEC16A isoform X1
KO
K19513
protein CLEC16A
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970029
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124970029
Membrane trafficking [BR:
ncar04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
124970029
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
124970029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
124970029
NCBI-ProteinID:
XP_047389012
LinkDB
All DBs
Position
18:complement(32953170..33143198)
Genome browser
AA seq
1052 aa
AA seq
DB search
MFGRSRSWVGGGHGKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
HPESMVRIAVRTITLNVYKVSLDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDTCVQT
DEEHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLSDHLLNRLFLPLYVSSLENPD
KGGERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGDLSEMYAKTEQDVQRSSAKP
SIRCFIKPTETLERSLELNKHKGKRRLPKRPNYKNVGEEEEEEKGAAEGAQDDAERAPGT
EGGSKGVKTSGDSEEIEMVIMERKLSELAASTSLQEQNTTDEEKSAAATCSAGVQWSRPF
LDMVYHALDSPDDDYHALFVLCLLYAMSHNKGIDPEKLERIQLPVPNEAEKTTYNHLLTE
RLIRIMNNAAQPDGKIRLATLELSCLLLKQQVLATSGCIMKDVHLACLQGAREESVHLAR
HFYKGEDIFLDMFEDEYRSMTMKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDVE
KTRRAIRVFFMLRSLSLQLRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDGG
MVQRFLAVDIYQMSLVEPDVSRLGWGVVKFAGLLQDMQVTGEYDDSRALNITIHKPTSSP
HSKPFPILQATFVFSDHIRCIIAKQRLAVGRIQARRMKMQRIAALLDLPIQPRTEVLGFG
LGSSASTQHLPFRFYDQCRRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSPSP
PSASGSPSSSGNTSHCDSGGSSSTPSATQSPADVPTTPEQPQPPPHLPHQLVIVSDMEAD
ARPSKSLARGTEVETAHLSPSLLPAQQPTISLLCEDTADTPSVESLTLVPPVDPHSLRTL
AGMPQPPTPATAGTETPEEEAASTEPTGPAQH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccgctcgcggagctgggtgggcgggggccatggcaagtcctcccgcaacatc
cactccttggaccacctcaaatatctgtaccacgttttgactaagaacaccacagtcaca
gagcagaaccggaacctgctggtggagactatccgttccatcaccgagatcctgatctgg
ggagatcaaaatgacagctctgtatttgacttcttcctggaaaagaacatgtttgttttc
ttcttgaacatcctgaggcagaaatcaggccgctatgtgtgtgttcagctgctgcagacc
ttgaacatcctcttcgagaatatcagtcacgagacttcactttattatttgctgtccaat
aactatgtaaattctatcattgttcataagtttgacttttctgatgaggagattatggca
tattacatatcgttcctgaaaacgctgtcgttaaagctcaacaaccacactgtccacttc
ttttacaacgagcacaccaatgactttgccctgtacacagaagccatcaaatttttcaat
caccctgaaagcatggttcgcattgctgtaagaaccataactttgaatgtctacaaagtg
tcattggataaccaggccatgctgcactatatcagagataaaaccgctgtcccttacttc
tccaatctggtctggttcatcgggagccatgtgatcgaacttgatacctgtgtgcagaca
gatgaggagcacaggaatcgggggaagctgagtgacctggtggctgaacacctggaccac
ctgcactatctcaatgacatactgatcatcaactgtgagttcctcaatgatgtgctcagt
gaccacctgctcaacaggctcttcctgcccctgtacgtgtcctccctggagaaccctgac
aagggaggagaacgaccgaaaatcagcctgccggtgtctctctatctcctgtcacaggtc
ttcctaattatacatcacgcacctctggtgaattccttagctgaagtcattctgaatggc
gatctgtctgagatgtatgccaagactgaacaggatgttcaaaggagttccgccaagccc
agcatccggtgcttcatcaagcccaccgagacgctggagcgctcccttgagctgaacaag
cacaagggcaagaggcggctgcccaagagacccaactacaagaacgttggggaggaggaa
gaggaggagaagggggctgccgagggcgcccaggacgacgccgagagggctccaggtaca
gagggtggttcaaaaggcgtgaagacgagtggggacagtgaagagatcgagatggtgatc
atggagcgcaagctctcggagttggccgccagcacctccctgcaggagcagaacaccaca
gatgaggagaagagcgctgcggccacgtgctctgcgggtgtgcagtggagcagacccttc
ctggatatggtgtaccatgccctggacagccctgacgatgattaccatgccctcttcgtg
ctctgcctcctgtacgccatgtctcacaacaaaggcatagatcctgaaaaactagagcga
atccagctgccagtgccaaatgaagccgagaagaccacctataaccatctgctgactgaa
agactcatcaggatcatgaacaatgctgcccaaccagatgggaagatccggctggctacc
ctggagctgagctgcctgctcctgaagcagcaggtcctggccacctctggctgcatcatg
aaggatgtgcacctggcctgcctacagggcgcaagagaagagagtgtccacctcgcaaga
catttttacaagggagaagacattttcctggacatgtttgaagacgagtacagaagcatg
acaatgaagcccatgaatgtggaatatctcatgatggacgcctccatcctgctgccccca
acaggcacaccactgacaggcattgactttgtgaagcgattgccatgtggtgacgtggag
aagacccggagggccatccgggtgttcttcatgctgcgttccctgtcactgcagctgcga
ggggaacctgagacccagttgccgctgactcgggaggaagacctgatcaaaaccgacgac
gtcctggacctgaataacagtgacttgattgcgtgcacagtgatcaccaaggatggtggc
atggtccagcgattcctggctgttgatatttatcagatgagtttggtggagcctgacgta
tcccggcttggctggggagtggtcaagtttgcaggccttctccaggacatgcaggtgact
ggcgagtacgacgacagccgtgccctgaacatcaccatccacaagcccacgtccagcccc
cactccaagcccttccccatcctccaggccaccttcgtcttctcagaccacatccgctgc
atcatcgccaagcagcgcctggccgtcggacgcatccaggcgaggcgcatgaagatgcag
aggatagcggccctcctggacctcccaatccagccaagaactgaagtcctgggctttgga
cttggctcctccgcctccacccagcacctgcctttccgcttctatgaccagtgccgcagg
ggcagcagcgaccccacagtgcagcgctctgtgtttgcatccgtggacaaggtgccaggc
ttcgctgtggcccagtgcataaaccagcacagctcgccgtccctgtcgtcaccgtcacca
ccatctgccagcgggagccccagcagcagcgggaacaccagccactgtgactcggggggc
tcatcctccaccccgtcagcgacccagagcccagcagacgtccccaccactccagagcag
cctcagcctccgcctcaccttccccaccagctggtgatcgtcagtgacatggaagcagac
gccaggcccagcaagagcctggccaggggcacagaggtggagacggcacacctgtccccc
agcctcctccccgcacagcagcccaccatctccctgctctgtgaggacactgccgacacg
cccagcgtcgagtcactgaccctggtcccgcccgtggacccccacagcctccgaaccctt
gctggcatgccccagcctcccacgccagccaccgcaggcacagagaccccagaggaagag
gctgcgagtacagagcccacgggccctgcccagcactga
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