Sciurus carolinensis (gray squirrel): 124970041 Help Entry 124970041         CDS       T08117                                  Name (RefSeq) integrin alpha-M-like isoform X1   KO K06461   integrin alpha M Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04015   Rap1 signaling pathway ncar04145   Phagosome ncar04514   Cell adhesion molecules ncar04610   Complement and coagulation cascades ncar04613   Neutrophil extracellular trap formation ncar04640   Hematopoietic cell lineage ncar04670   Leukocyte transendothelial migration ncar04810   Regulation of actin cytoskeleton ncar05133   Pertussis ncar05134   Legionellosis ncar05140   Leishmaniasis ncar05146   Amoebiasis ncar05150   Staphylococcus aureus infection ncar05152   Tuberculosis ncar05202   Transcriptional misregulation in cancer ncar05221   Acute myeloid leukemia Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     124970041   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     124970041  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     124970041   09142 Cell motility    04810 Regulation of actin cytoskeleton     124970041  09150 Organismal Systems   09151 Immune system    04640 Hematopoietic cell lineage     124970041    04610 Complement and coagulation cascades     124970041    04613 Neutrophil extracellular trap formation     124970041    04670 Leukocyte transendothelial migration     124970041  09160 Human Diseases   09161 Cancer: overview    05202 Transcriptional misregulation in cancer     124970041   09162 Cancer: specific types    05221 Acute myeloid leukemia     124970041   09171 Infectious disease: bacterial    05133 Pertussis     124970041    05134 Legionellosis     124970041    05150 Staphylococcus aureus infection     124970041    05152 Tuberculosis     124970041   09174 Infectious disease: parasitic    05146 Amoebiasis     124970041    05140 Leishmaniasis     124970041  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ncar04131]     124970041   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ncar04147]     124970041    04515 Cell adhesion molecules [BR:ncar04515]     124970041    04090 CD molecules [BR:ncar04090]     124970041    00536 Glycosaminoglycan binding proteins [BR:ncar00536]     124970041 Membrane trafficking [BR:ncar04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     124970041 Exosome [BR:ncar04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    124970041 Cell adhesion molecules [BR:ncar04515]  Integrins   Integrin alpha subunits    124970041 CD molecules [BR:ncar04090]  Proteins   124970041 Glycosaminoglycan binding proteins [BR:ncar00536]  Heparan sulfate / Heparin   Adhesion molecules of cell surface    124970041 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ITGAX-like_Ig_3 VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 FG-GAP_3 Integrin_alpha Motif Other DBs NCBI-GeneID:  124970041 NCBI-ProteinID:  XP_047389039 LinkDB All DBs Position 18:complement(18854940..18896690) Genome browser AA seq 1164 aa AA seqDB search MLLPRSLLLSAMTCTVLLLTVLALCHAFNLDTENPMIFQENARGFGQSVVQFEGSRVVVG APKEIRADNQTGGLYQCDFSTLKCEPIRFQVPLEAVNMSLGLSLVTATNPSRLLACGPTV HQTCKENTYVNGFCFLFGSNLLQQPQRFPEALRECPQQESDIAFLIDGSGSINPNDFQKM KDFVSTVMDKFKKSKTLFSLMQYSDDFQTHFTFSYFKKNPNPRSLVNPITQLLGTTHTAT GIRKVVRELFQSAYGARENAVKILVVITDGEKYRDPLNYEDVIPEADRAGVIRYVIGVGD AFNNDRSRQELNTIASKPAREHVFRVNNFEALKTIQNQLQEKIFAIEGTQTGSTSSFEHE MSQEGFSAAITSNGLLLGSVGSFDWAGGAFLHKSKNEITFINATRVNSDMNDAYLGYAAA VILRNRVQSLVLGAPRYQHIGLVMMFRQNAGAWETNADIKGNQIGSYFGASLCSVDMDGD GNTNLVLIGAPHFYEQTRGGQVSICPLPKGQRARWRCEAVLHGEQGHPWGRFGAAMTALG DVNGDKLTDVAIGAPGEQENRGAIYIFHGTSVFSISPSHSQRIAGSQLSPQLQYFGQSLS GGQDLTMDGLVDLAVGAQGQVLLLRSQPVLRVVVTMEFTPREVARDVFECREQVARSTAA GEVRVCLLVRKSTRDRLREGDIQSTVTYDLALDSGRPHSRAIFDDTKNSTRRRTQTFSLT QKCETLKLSLTDCVEDSVSPITLRLNYTLLGMPLSSFGNLRPVLAVDAQRLFIASFPFEK NCGNDSICQDDLSLTFSFMNLDTLVVGDPQDFNVTLTVRNEGEDSYRTQVTFYHPAGLFY RKVSGAQNQRSQRSWRLTCESGSSTEGPRALKSTSCSINHPIFPGNSEVTFNVTFNVESD AFLGNKLLLKANVTSENNMPRTNKTEFQLQLPVKYAVFLVVTSTEVSTKYLNFTASEKTS HIIQHQYKFNNLGQRSLPISVTFWVPVQLNHVTVWDHPQVIFSQNVSNTCHTEKRLPPYS DFQAALKKTPVLNCSIAVCQKIQCEIPSFGVQEDFNVVLKGNLSFDWYIKTSHNHLLLVS TAEILFNDSMFALLPGQGMFVRSQTETKVEPYEIHNPLPLIVGSSIGGLVLLALITAALY KLGFFKRQYKDMMNEAGPQEAPPQ NT seq 3495 nt NT seq  +upstreamnt  +downstreamnt atgcttcttcccaggtccctgctcctttcagccatgacttgtacagttcttctgttaaca gtcttagccctgtgtcacgcgttcaacctggatactgaaaatccaatgatcttccaagag aatgcaaggggctttgggcagagtgtggtccagtttgagggatcccgggttgtggttgga gctcccaaggagataagggctgacaaccaaacaggtggcctctaccagtgcgacttcagc accctcaagtgtgagcccatccgctttcaggtccccctggaggctgtgaacatgtccttg ggcctgtccctggtgactgccaccaacccctcccggctgctggcctgtggccccaccgta caccaaacttgcaaggagaacacgtatgtgaatggcttctgcttcctgtttggatccaac cttctgcagcagccccagaggtttccagaggccctcagagaatgtcctcagcaggagagt gacattgcctttttgattgatggctctggtagcatcaacccaaatgactttcagaagatg aaggactttgtctcaacagtgatggacaaattcaaaaagtctaaaaccttgttctctttg atgcagtactcagatgacttccagactcatttcaccttcagctatttcaagaaaaatcct aacccaagatcactggtaaacccaataacacagctgcttggaacaactcacactgccaca ggaatccgcaaagtagtaagagaactgtttcagagtgcctatggagcccgggagaatgct gttaagatcctagttgtcatcacagatggagaaaagtatcgagatcccttgaattatgag gatgtcatccctgaggcggacagagcgggggtcattcgctatgtcattggggtgggagat gccttcaacaatgacagatcccgccaagagcttaatactattgcctctaaaccagctcgt gaacatgtgttccgggtgaataactttgaagctttaaagaccattcaaaaccagcttcag gaaaagatctttgcaattgaaggtactcagacaggaagtaccagctcctttgagcatgag atgtctcaggaaggcttcagtgctgccatcacttctaatggtctcttgttgggctctgtg gggagctttgactgggctggtggagcctttttgcataagtcaaagaatgaaatcaccttc atcaacgcaaccagggtgaactcagacatgaacgatgcttacttgggttatgcagctgca gtcatcctgaggaaccgggtgcaaagccttgttctgggggcacctcgatatcaacacatt ggcctggtgatgatgttcagacagaatgctggtgcctgggagaccaatgctgatatcaag ggcaaccagattggctcctactttggggcttccctctgctcggtggacatggatggtgat ggaaataccaacctggtcctcattggggcaccccatttctatgagcagacccgagggggc caggtgtccatttgtcccttgcctaaggggcagagggctcggtggcggtgtgaggctgtt ctccacggtgagcagggccatccctggggccgctttggggcagctatgacagcgctgggc gatgtgaatggggacaagctgacagacgtggctattggagccccaggagaacaggagaat cggggtgctatctacatttttcatggaacatcagtattcagcatcagcccctcccacagt cagcggattgcaggctcccagctttccccccagctccagtattttggtcagtcactgagt ggaggacaggacctcacaatggatggattggtggacctggctgtaggggcccaggggcaa gtactgctgctcagatcgcagccagtgcttagagttgtggtgaccatggagttcacaccc agggaagtggcaagggatgtatttgagtgtcgtgaacaggtggcgagaagcacggctgct ggtgaggtcagagtctgcctccttgtccgcaagagcacacgggatcggctaagggaagga gatatccagagcactgtcacttatgacctggctctggactctggccgcccacattcccga gccatctttgatgacacaaagaacagcacacgcagacggacacaaaccttcagcctgaca cagaaatgcgagaccctgaagctatcgttaacggattgtgtggaggactcagtgagccct attaccctgcgcctcaactacactctgttggggatgcccttgtcctcttttggaaacctt cggccagttctggctgtggatgctcagagactgttcatagcctcgtttccctttgagaag aattgtggtaatgacagcatttgccaggatgacctcagcctcaccttcagtttcatgaac ctggacaccttggtggtgggcgatccccaggatttcaatgtgaccttgaccgtgagaaac gagggcgaggattcctacaggacacaggtcaccttctaccacccagctggcttgttctat cggaaggtgtcaggggcccagaaccagcgctcacagcgatcttggcgtctgacctgcgag tctggttcttccactgaaggacctagagctttgaagagcaccagctgcagcatcaaccac cccattttcccagggaactcagaggttacctttaatgtcacatttaatgtggagtctgat gctttccttggaaacaagctactcctcaaggctaatgtgaccagtgagaataacatgccc aggaccaacaaaactgaattccaactgcagctgcctgtgaaatatgctgtcttcttggta gtcaccagtactgaggtttctaccaaatatctcaacttcactgcctcggagaagaccagt catattatacagcatcaatataagttcaacaacctgggccagaggagcctccccatcagt gtgaccttctgggtccctgtccagctgaaccatgtgacagtctgggatcaccctcaggtc atcttctcccagaatgtctcaaacacttgccacactgagaagagactccctccctactct gacttccaggctgcgcttaagaagaccccagtgctgaactgctccattgctgtctgtcag aaaatccagtgtgaaatcccatcctttggtgtccaggaagacttcaatgttgtcctcaaa ggcaacctttcatttgactggtatatcaagacttcacataaccacctcctgctggtgagc acagcagagatcttgtttaatgattccatgtttgccctacttccaggacaggggatgttc gtgaggtcccagacagagaccaaagtcgaaccatatgaaattcacaaccctctgccactc attgtgggcagctccattgggggacttgtgctcctggccctcatcactgctgcactgtac aagcttggcttctttaagcgacagtacaaggacatgatgaatgaagctggtccccaagag gccccaccccagtaa

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