Sciurus carolinensis (gray squirrel): 124970048
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Entry
124970048 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 72
KO
K12036
tripartite motif-containing protein 72
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970048
04121 Ubiquitin system [BR:
ncar04121
]
124970048
Membrane trafficking [BR:
ncar04131
]
Exocytosis
Others
Others
124970048
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124970048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-B_box
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-Nse
zf-RING_6
RING_XB3-XBAT31
K-box
Motif
Other DBs
NCBI-GeneID:
124970048
NCBI-ProteinID:
XP_047389056
LinkDB
All DBs
Position
18:complement(18942012..18950315)
Genome browser
AA seq
477 aa
AA seq
DB search
MSAAPGLLHQELSCPLCLQLFDAPVTAECGHSFCRACLGRVAGEPAADGTVPCPCCQAPT
RPQALSTNLQLSRLVEGLAQVPQGHCEEHLDPLSIYCEQDRALVCGVCASLGSHRGHRLL
PAAEAHARLKKQLPQQKLQLQEACMRKEKSVSVLEHQLMEVEETVRQFRGAVGEQLGKMR
VFLAALEGSLDREAERVRSEAGVALRRELAGLNSYLDQLRQMEKVLEEVADKPQTEFLMK
YCLVTSRLQKILSESPPPARLDIQLPVISDDFKFQVWRKMFRGLMPALEELTFDPSSAHP
SLVVSPSGRRVECCEQKAPPAGEDPRQFDKAVAVVTHQLLSEGEHYWEVEVGDKPRWALG
VMAADATRRGRLHAVPSQGLWLLGLRDGKILEAHVEAKEPRALRNPERRPSRVGLYLSFR
DGVLSFYDASDSDALELLFAFHERLPGPVYPFFDVCWHDKGKNAQPLLLVGPDGEEA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcacccggtctcctgcaccaggagctgtcctgcccgctgtgcctgcagctg
ttcgatgctcctgtaaccgccgagtgtggccacagtttctgccgcgcctgcctgggccga
gtggcaggggagccagcagcggatggcacggtgccttgcccttgttgtcaggcacccacg
cggccgcaggctctcagcaccaacctgcagctgtctcgcctggtggagggtctggcgcag
gtgccacagggtcactgcgaggaacacctagatcctctgagcatctactgcgagcaggac
cgagcgctggtgtgcggcgtttgtgcctctctcggttcgcaccgtggccaccgcctgcta
cccgcggcggaggcccatgcgcgccttaagaagcaactcccacagcagaagctgcagctg
caggaggcctgtatgcgcaaagagaagagcgtatctgtcctggagcatcagttgatggag
gtggaggagacagtgcgtcagttccggggggctgttggggagcagctgggcaagatgcgg
gtgttcctggctgcactggagggttctttagaccgtgaggcagaaagagttcggagtgag
gcaggggttgctttgcggcgggagctggcaggtttgaactcttacctggatcagctgcgg
cagatggagaaggtgctggaggaggtagctgataagccacagactgaattcctcatgaaa
tactgcctggtgaccagcagactgcagaagatcctgtcagagtcaccgccacctgcacgt
ctggatatccaactgcctgtgatctcagatgacttcaaattccaggtgtggaggaagatg
ttccggggtctgatgccagcactagaggagctgacttttgacccaagctcagcgcacccc
agtctggtggtgtctccctctggccgccgcgtggagtgctgcgagcagaaggcgccacca
gctggcgaagacccgcgccagttcgacaaggccgtggcggtggtaacgcaccagctgctc
tccgagggcgaacactactgggaggtggaggtgggcgacaagcctcgctgggctctcggc
gtgatggcggcggatgccaccagacgtggccgactgcacgcggtgccctcacagggcctc
tggctgctagggttgcgtgatggcaagatcctggaggcgcacgtggaggccaaggagcca
cgtgcactgcgcaacccagagaggcggccgtcgcgggttggcctctatctaagcttccgc
gacggtgtcctctctttctatgatgctagcgattctgatgcgctcgagctgctctttgcc
ttccatgagcgcctgccggggccagtgtatcccttctttgacgtgtgctggcatgacaag
ggcaagaacgcccagccgctgctgctcgtggggcctgatggcgaggaggcctga
DBGET
integrated database retrieval system
