Sciurus carolinensis (gray squirrel): 124970054
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Entry
124970054 CDS
T08117
Name
(RefSeq) syntaxin-4 isoform X1
KO
K13502
syntaxin 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04962
Vasopressin-regulated water reabsorption
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124970054
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
124970054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970054
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124970054
Membrane trafficking [BR:
ncar04131
]
SNARE
Syntaxin (Qa)
Stx-PM
124970054
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124970054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF7082
DUF6584
ETRAMP
DUF16
AAA_13
T2SSF
DUF3671
ERp29
Lectin_N
Motif
Other DBs
NCBI-GeneID:
124970054
NCBI-ProteinID:
XP_047389065
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All DBs
Position
18:complement(19094932..19105731)
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AA seq
298 aa
AA seq
DB search
MRDRTRELRQGDNSSDDEDKERVALVVHPGTARLGSPDDEFFQKVQTIRQTMVKLENKVR
ELEKQQVTILATPLPEESMKQDLQNLRDEIKQLGREIRTQLRAIEPQKEEADENFNSVNT
RMRKTQHGVLSQQFVELINKCNSMQSEYREKNVERIRRQLKITNAGMVSDEELEQMLDSG
QSEVFVSNILKDTQVTRQALNEISARHSEIQQLERSIRELHEIFTFLATEVEMQGEMINR
IEKNILSSADYVERGQEHVKKALENQKKARKKKVMIAICVSITVLILAVIIGITTAVG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacaggacccgcgagctgaggcagggggataacagttcggacgatgaggacaag
gagcgagtcgcgcttgtggtacacccgggcacagcacggctggggagtccagacgatgag
ttcttccagaaggtccagacaattcggcagactatggtcaaactggagaataaagtccgg
gagttggagaagcagcaggtcaccatcctggccacgccccttcccgaggagagcatgaag
caggacctgcagaacctgcgtgatgagatcaaacagctgggaagggagatccgcacccag
ctgagggccatagagcctcagaaggaggaagctgatgagaattttaactcggtcaacaca
agaatgagaaaaacccagcatggggtcctgtcccagcaatttgtggagctcatcaacaag
tgtaattcaatgcagtctgaataccgggagaagaacgtggagcgcattcggaggcaactg
aaaatcactaatgctggaatggtttctgatgaggagctggagcagatgctggacagtggg
cagagtgaggtgtttgtgtccaatattctgaaggacacacaggtgactcgacaggcccta
aatgaaatctcagcccgacacagtgagatccagcagcttgaacgcagcatccgtgagctt
catgagatcttcacttttctagctactgaggtggagatgcagggggaaatgatcaaccgg
atagaaaagaacatcttgagctcagcagactatgtggaacgtgggcaggaacatgtcaag
aaagctctagagaaccagaagaaggcgaggaagaagaaagtcatgattgccatctgtgtg
tccatcactgttctcatcctggctgtcatcattggcatcaccacagcggttggataa
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integrated database retrieval system
