Sciurus carolinensis (gray squirrel): 124970057
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Entry
124970057 CDS
T08117
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124970057
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
124970057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970057
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124970057
Membrane trafficking [BR:
ncar04131
]
SNARE
Syntaxin (Qa)
Stx-PM
124970057
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124970057
Exosomal proteins of other body fluids (saliva and urine)
124970057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Spectrin_Anc-1
Relaxase_C
GNVR
FAD_binding_1
Baculo_PEP_C
ARM_ECM29
Polysacc_deac_2
VBS_C3G9
CAP_N
Motif
Other DBs
NCBI-GeneID:
124970057
NCBI-ProteinID:
XP_047389069
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All DBs
Position
18:19119857..19138231
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AA seq
288 aa
AA seq
DB search
MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcggactcaggagctgcggagtgcgaaagacagtgatgatgaggaggaggtg
gttcacgtggatcgggaccactttatggatgagttctttgaacaggtggaagagatccga
ggctgcattgagaagctgtcggaggacgtagagcaggtgaaaaaacagcacagtgccatc
ctggcggcgcccaacccagatgaaaagaccaaacaggagctggaggacctcactgcagac
atcaagaagacggccaacaaggtccggtccaagttgaaagcgatcgagcaaagcattgaa
caagaggagggactgaaccgttcctccgcggacctgcgcatccgcaagacccagcactct
acgctctcccggaagtttgtggaggtaatgaccgaatataacgcgacccagtccaagtac
cgggaccgctgcaaggaccggatccagcgacagctggagatcaccggcaggaccacgacc
aatgaagaactggaagacatgctggagagcgggaaactggccatcttcacggatgatatc
aaaatggactcgcagatgacaaagcaggcactgaatgagatcgagacgaggcacaacgag
atcatcaaattggaaaccagcatccgcgaactacacgacatgttcgtggacatggccatg
cttgtggaaagccagggggagatgattgaccgcatcgagtacaacgtggaacattccgtg
gactatgtggagcgagctgtgtccgacaccaagaaagctgtgaaataccagagcaaggcg
cggaggaagaaaatcatgatcatcatttgctgtgtggtgctgggggtggtcttggcgtca
tccattggggggacgctgggattgtag
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integrated database retrieval system
