Sciurus carolinensis (gray squirrel): 124970091
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Entry
124970091 CDS
T08117
Name
(RefSeq) rab11 family-interacting protein 3-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124970091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970091
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
124970091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
WD40_alt
EF-hand_5
PIN_12
ZapB
CpXC
Motif
Other DBs
NCBI-GeneID:
124970091
NCBI-ProteinID:
XP_047389113
LinkDB
All DBs
Position
18:complement(41196270..41266593)
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AA seq
688 aa
AA seq
DB search
MEPGRPASPPGRGEPARGAAEPGDRAPCVLSRRSPCPALARAVGERPLARPGPSADPSPA
PLPPGEPAAGPEDDARLRAVFDALDGDGDGFVRIEDFVQFATVYGAEQSGRRRSLKDSNT
LASVPSVKDLTQYLDPSGLGVISFEDFYQGITAIKNGEPDGHLPSMAPAQDEEPPACADD
FDDFVTYEANEVTDSAYMGSESTYSECETFTDEDTSTLVHPELQPEGDADSAGGSAVPSE
CLDAMEEPDHGALLLLPGRPRPRNQAVVMVMGSEEHFEDYGEGSEAELSPETLCSGELGC
SDPTFLTPSSDPLASKLHSILTDEAFEFYCSQCHKQINRLEDLSARLNDLEMNSPAKQLS
SRKVARYLHQSGALTMEALEDPPPEPVEGPEEDIADKVVFLERRVSELEKDSAAAGEQHG
RLRQENLHLVHRANALEEQLKEQELRAQEMVLEEARKQKELLCRMEREKSIEIENLQARL
QQLDEENGELRSCTPCLKANIERLEEEKQKLLDEIEGLTLRLSEEQESKRKMGDRLSHER
HQFQRDKEATQELIEDLRKQLEHLQLLRLEAEQRRGRSSSLGLQEYNSRTRESELEQEVR
RLKQDNRNLKEQNEELNGQIITLSIQGARSLFSTAFSESLAAEISSVSRDELMEAVQRQE
EINLRLQDYIDRIIVAIMETNPSILEVK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggccggccggcctccccgccgggccgcggcgagccggcgcgcggggccgcg
gagccgggggaccgcgcgccctgcgtgctctcccggcgcagcccgtgccccgcgctcgcg
cgcgcggtgggcgagcggccgctggcgcgacccggcccgtccgccgaccccagccccgcg
ccgctgccgcccggcgaacccgccgccggcccggaggacgacgcgcgcctccgcgcggtg
tttgacgccctggacggggacggggacggcttcgtccgcatcgaggatttcgtccagttc
gccacagtctacggagcagagcagtctgggagacggcgctcactgaaggattcaaacaca
ctggcttctgtaccttcggtgaaggacttaactcagtacttggatcccagtgggctcggc
gtgatcagttttgaagacttctaccaggggatcacagctatcaaaaatggagaacccgat
ggccacctgcccagcatggcgcctgcccaggatgaggagccccctgcctgtgctgatgac
ttcgatgacttcgtcacctacgaggccaacgaggtgacggacagcgcgtacatgggctca
gagagtacctacagcgagtgtgagacctttaccgatgaggacaccagcaccctggtgcac
cctgagctgcagcccgagggggatgccgacagtgctggcggctccgctgtgccctctgag
tgcctggacgccatggaggagcctgaccatggtgctctgctgctcctcccaggcaggcct
cgcccccgcaaccaggccgttgtcatggtgatgggcagcgaggagcatttcgaggactac
ggtgagggcagcgaggcggagctgtccccagagaccctctgcagcggggaactgggctgc
agtgaccccactttcctcacccccagctccgacccgcttgcctcaaagctgcacagcatc
ctcactgacgaggcttttgagttttactgtagccagtgccacaaacaaatcaaccgtctt
gaggacctttctgcccgcctgaatgatcttgagatgaatagcccagccaagcagctgtcc
agcaggaaggtggcaaggtacctgcaccagtcaggggccctgaccatggaggccctggag
gaccctcccccagaacctgtggagggtccagaggaggacattgctgacaaggttgtattc
ctggagaggcgggtgtcagagctggaaaaggacagtgctgcagccggagagcagcacggc
cggctgcggcaggagaacctgcatctggtgcatagagccaatgccctggaggagcagttg
aaggagcaggagctaagagcccaggagatggtcctggaagaggcccggaagcagaaggag
ctcctgtgcaggatggagcgggagaagagcattgagattgagaacctacaggccaggctg
cagcagctggatgaggagaatggcgagttgcggtcctgcacaccttgcctgaaggccaac
attgagcgcctagaagaggagaagcagaagttgctggatgagattgaagggttgacactt
cggctcagtgaagagcaggagagcaagaggaagatgggggacaggctgagccatgagcgg
caccagtttcagagagacaaggaagcgacccaggagctgatagaggacctgcgcaagcag
ctggagcacctgcagctcctgaggctggaggctgagcagagacggggccgcagcagcagc
ctgggcctgcaagagtacaacagccgcaccagggagagcgagctggagcaggaggtccgc
aggctcaagcaggacaaccgcaacctgaaggagcagaacgaggagctcaatgggcagatc
atcaccctcagcattcagggcgcccggagcctcttctccacagccttctctgagtccctt
gctgcggagatcagctccgtgtcccgagacgagctcatggaggctgtccagaggcaagag
gagatcaacctccgcctgcaggactacatcgacaggatcatcgtggccatcatggaaacc
aacccatccatcctggaggtcaagtag
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