KEGG   Sciurus carolinensis (gray squirrel): 124970096
Entry
124970096         CDS       T08117                                 
Name
(RefSeq) claudin-6 isoform X1
  KO
K06087  claudin
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03272  Virion - Hepatitis viruses
ncar04382  Cornified envelope formation
ncar04514  Cell adhesion molecules
ncar04530  Tight junction
ncar04670  Leukocyte transendothelial migration
ncar05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    124970096
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124970096
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124970096
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    124970096
  09158 Development and regeneration
   04382 Cornified envelope formation
    124970096
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    124970096
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ncar03037]
    124970096
   04147 Exosome [BR:ncar04147]
    124970096
   04515 Cell adhesion molecules [BR:ncar04515]
    124970096
Cilium and associated proteins [BR:ncar03037]
 Other cilia and associated proteins
  Stereociliary proteins
   124970096
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   124970096
  Exosomal proteins of colorectal cancer cells
   124970096
Cell adhesion molecules [BR:ncar04515]
 Immunoglobulin superfamily
  L1 family
   124970096
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2
Other DBs
NCBI-GeneID: 124970096
NCBI-ProteinID: XP_047389125
LinkDB
Position
18:39175780..39179398
AA seq 249 aa
MRTRHCPLGAQTWNLWDREHQHSPFNPAMASAGLQILGIVLTLLGWVKALVSCALPLWKV
TAFIGNSIVVAQVVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVVTLLLAL
LGLLVYLAGAKCTTCVEDQDSKARLVLTSGIIFVISGVLTLIPVCWTAHTIIQDFYNPLV
AEAQKRELGASLYLGWAASGLLMLGGGLLCCTCPSGEARNSSHYMARYSASVPHSPSRGP
SEYPTKNYV
NT seq 750 nt   +upstreamnt  +downstreamnt
atgcggacccggcactgcccactcggcgcccaaacctggaacttgtgggatagggagcat
cagcatagccctttcaaccctgccatggcctctgctggtctgcagattctgggaattgtc
cttacgttgctgggctgggtaaaggctctggtttcctgcgccctgcccctgtggaaggtg
accgctttcatcggcaacagcatcgtggtggcccaggtggtgtgggaggggctgtggatg
tcctgcgtggtgcagagcaccggccagatgcagtgcaaggtgtacgactcgctgctggcg
ctgccccaggacctgcaggctgcgcgcgccctctgtgtcgtcaccctcctcttggccctg
cttggcctgctggtctaccttgctggggccaagtgcaccacctgtgtggaggaccaggat
tccaaggcccgcctggtgctcacttctgggatcatctttgtcatctcaggggttctaacc
ctgatcccagtctgctggacggcccacaccatcatccaggacttctacaaccccctggtg
gctgaggcccaaaagagagagctgggggcctccctctacctgggctgggcggcctccggc
cttctgatgctgggtggggggctgctgtgctgcacctgcccctccggagaggcccggaac
tccagccattacatggcccgctattcagcatctgtcccacattccccctcccggggaccc
tccgagtaccccaccaagaattatgtttga

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