Sciurus carolinensis (gray squirrel): 124970130
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Entry
124970130 CDS
T08117
Name
(RefSeq) zinc finger protein 420-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124970130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124970130
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124970130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_6
Zn-ribbon_8
C1_4
zf-AN1
Motif
Other DBs
NCBI-GeneID:
124970130
NCBI-ProteinID:
XP_047389189
LinkDB
All DBs
Position
18:complement(13215001..13236422)
Genome browser
AA seq
995 aa
AA seq
DB search
MNKSQEGAVQGSVSFQDVTVNFSRDEWLCLNRTQRTLYREVMLENYSHLVSVGCCFTKPD
VILRLEQGEDPWTLEEEFPGQAYPKVQKLSDLVKRSQRHQDEHSCCASLLHNTLTEKREN
VSGKTRNLDINLVSSRKTPHENDSGGVSVKQISESSVTDKNDSSRNSSALNTHGTSPLDC
EQENTQTGKKSDECNQGGESLSGNEDLTEQQEVQALGPPWEDDDSGKASPEQAATTSLQT
AQAGEKPCNHEEPRGSTSAMSVPDVPQEHQTRTDCPEVNECEKAVVCEHQKVNMEEKTQE
ASENEEISKEPRLTQAPGAYTGENTFECSRCRTSFCQESQLTDHQRTHTQGEPRKGSKHG
KTFQKSQLTDSKRTNRREKRREYKARGKAPVKSPLRDQQRTQPAKKLYVCDDCGKPFRYC
SALRVHQRIHTGEKPYKCPECGKSFYAKSNFTHHQRTHTGEKPFECQECGKSFSVKSNLT
KHQKTHRGEKPFKCSECEKTFFQKSQFADHQRTHTGEKPYKCTECGKSFYYKSALNVHQG
KHREEKPYKCTECGKSFCYKSALIIHQVTHTGKKPYDCSECGKTFCVKSNLTKHQKIHTG
EKPYTCNECGKSFSMNSILVVHQRTHTGEKPYKCNECEKSFYKKSALTKHQRTHTGEKPH
ECPECGKSFHMKSTLIIHQRTHTGEKPYKCNECEKSFYVKSHLNIHQRNHTGKKPHVCGE
CGKAFSMKSNLTDHQRTHSEERPYKCNDCQKTFRHKSTLTVHKRTHTGEKPYKCNDCGKS
FYMKSALSQHQRIHTGEKPYDCKQCGKAFFQKSHLTKHHRTHTGEKPYECMECGKTFFQK
SHLIEHQRTHTGEKPHECSECGKSFCYKSALTIHQRTHTEEKPYKCSDCDKSFCMKSHLT
VHQRTHSGKHPFECYECGKSFYVKSNLINHQRTHTGEKPYICSTCGKSFYMKSALTVHQR
GHTGEKPYECNKCGKAFCKKSALTSHQVVHRRATP
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctcaggaaggtgctgtccaaggatctgtgtcattccaggatgtgactgtg
aacttcagccgggacgagtggctgtgcctgaacaggactcagaggaccctgtaccgggag
gtgatgctggagaactatagccacctggtctctgtgggatgctgcttcaccaaaccagac
gtgatcctcaggttggagcaaggagaagatccatggacattagaggaagagttcccaggc
caggcttatccaaaagtccagaagctaagtgatctggtaaagagaagccagagacaccaa
gacgaacactcgtgttgtgcgtccctcctacacaacacactgactgagaagagagagaac
gtttctggaaaaacacgtaatctggacataaacctggtttcttcaagaaaaacaccccat
gaaaatgactcaggtggagtgagtgtgaaacaaatttcagaatcaagtgttactgataaa
aatgattcaagtaggaactccagtgcacttaacacacacgggacgtcgcctcttgactgt
gagcaagaaaacactcagactgggaagaagtccgatgagtgtaaccagggtggggaatct
ctaagtggtaatgaggatcttactgagcaacaggaagttcaagcgttgggaccaccttgg
gaagatgatgatagtggaaaagcctctcctgagcaggcagccaccacctccctccagacg
gcacaggcaggagagaagccctgtaaccacgaggagcccagaggaagtaccagtgccatg
tcagtccccgatgtccctcaggaacatcagacaaggacagattgccctgaagttaacgag
tgtgagaaggcagtggtctgtgagcaccagaaagttaacatggaggagaaaacccaggaa
gccagtgaaaatgaggagatcagcaaggagccccgtctcactcaagctcctggagcttac
acaggggagaacacctttgaatgcagtcgctgcagaacatctttttgccaggagtcccaa
ctcactgaccatcagaggacccatacacaaggggaacctcgtaaaggtagtaaacatggg
aaaacattccagaagtcacaactcactgactcaaagagaactaaccgaagagagaaacgc
cgtgagtataaagcacgtggaaaagcccctgtgaagtcccctctcagggaccagcagagg
acacagccagcaaagaagctctatgtatgtgatgactgtgggaaacccttccgttactgc
tcagccctcagagtccatcagcggatccatacgggggagaagccctacaagtgccctgag
tgtgggaagtccttctatgccaagtccaacttcactcatcaccagagaacccacacaggg
gagaaaccctttgaatgccaggaatgcgggaagtccttctctgtgaagtcaaacctcact
aaacaccagaagacacataggggggagaagcctttcaaatgtagcgaatgcgagaaaacc
ttcttccagaagtcgcaatttgctgaccatcagagaacccacacaggggagaaaccctac
aaatgcactgagtgtgggaaatctttttactataagtcagccctaaacgtacatcagggg
aagcacagagaagagaaaccctacaaatgtactgaatgtgggaaatccttctgctataag
tcagccctgattatacatcaggtgactcacacagggaagaaaccctatgactgtagtgag
tgtgggaaaaccttctgtgtgaagtcaaatctcactaaacaccagaaaattcacacaggg
gagaaaccctatacatgtaatgagtgtggcaaatctttctctatgaattcaatcctcgtt
gtgcaccagcgaactcacacaggggagaaaccctacaaatgcaacgaatgtgagaagtcc
ttttacaaaaagtcagctcttactaaacatcagagaactcacactggggagaaaccacac
gaatgtcctgaatgtgggaagtcttttcatatgaaatccacccttattattcaccagaga
actcacactggagagaaaccctacaaatgtaatgaatgtgaaaagtctttctatgtgaag
tctcaccttaatatccatcagagaaaccacacagggaagaaaccccatgtgtgtggtgag
tgtgggaaagccttttctatgaagtcgaacctcactgatcatcagaggacgcattcagag
gagagaccttacaaatgtaacgactgtcagaaaacctttcgccacaagtcaaccctaact
gtacacaagagaactcatacaggtgagaaaccctacaaatgtaatgactgtgggaaatcc
ttctatatgaagtcagccctcagtcaacatcagagaatacacacaggcgagaagccctac
gattgtaaacagtgcgggaaggccttcttccagaaatcacacctcactaaacatcatcgc
acacacacaggggagaagccctatgaatgcatggaatgtgggaagaccttcttccagaag
tcacacctcatcgaacaccagcgaacacacactggggagaaaccccacgagtgtagtgaa
tgtgggaaatccttctgctataagtcagccctaaccatccatcagagaactcacacagag
gagaaaccctacaaatgtagtgactgtgacaagtctttctgcatgaaatcacacctcact
gtacatcagagaactcactcggggaaacatccctttgaatgttatgaatgtgggaagtct
ttttatgtgaagtcaaacctcatcaaccaccagcggactcacaccggggagaagccttat
atatgcagtacgtgtgggaaatccttctatatgaagtcggccctcacagttcatcaacgg
ggacacaccggggagaagccctatgaatgtaataaatgtgggaaagccttctgcaagaag
tcggctctcactagtcatcaggtggttcacaggagagcgacaccctga
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