Sciurus carolinensis (gray squirrel): 124970147
Help
Entry
124970147 CDS
T08117
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124970147
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124970147
Peptidases and inhibitors [BR:
ncar01002
]
Serine peptidases
Family S54: Rhomboid family
124970147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580
Motif
Other DBs
NCBI-GeneID:
124970147
NCBI-ProteinID:
XP_047389235
EnsemblRapid:
ENSSCRG00010022829
LinkDB
All DBs
Position
18:complement(41060728..41063377)
Genome browser
AA seq
430 aa
AA seq
DB search
MTRLERGARRAEQEERAGRGGAEPFAEQPLPASADPGPLPGPALWTGARCCSSSRSRPRP
AAPPPQQLDPENTGFIGADTFAGLVHSHELPLDPAKLDMLVALAQSNERGQVCYQELVDL
VSATISSKRSSSFKRAIANGQRSLPREGLLDEPGLGVYKRFVRYVAYEILPCEVDRRWYF
YRHRSCPPPVFMASVTLTQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRF
LTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITDMRAPV
VGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPSS
GPQPSFMAHLAGAVVGVSMGLTILRSYEERLQDQCGWWVVLLAYGTFLLFAIFWNIFAYD
LLGAHIPPPP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacttgagcgcggcgcgcgcagagcagagcaggaggagcgggccggcaggggc
ggagcggagccgttcgcagagcagcccctcccggcctcggccgaccccggcccgctgccc
ggcccggctctatggacaggagctcgctgctgcagctcatccaggagcaggcctcggccg
gcggctcccccaccccagcagctggaccctgagaacacaggcttcatcggtgcggacacc
ttcgctgggctggtgcacagccatgagctgcccctggacccggccaagttggacatgctg
gtggccctggcccagagcaacgagcggggtcaggtctgctaccaggagctggtggacctg
gtcagtgccacgatcagcagcaagcgctccagcagcttcaagcgggccattgctaatgga
cagcggtcgctgccccgggaagggctgctggatgagcctggcctgggtgtctacaagcgg
tttgtgcgctacgtagcctatgagatactgccctgtgaagtagaccgccgctggtatttc
tatcggcaccgcagctgcccaccccctgtgtttatggcctcagtcaccctcacccagatc
atcgtgttcctgtgctatggggcacgcctcaacaagtgggtgctgcagacctaccaccct
gagtacatgaagagccccctggtgtaccaccctgggcaccgtgctcgtgcctggcgcttc
ctcacttacatgttcatgcacgtcgggttggagcagctggggttcaatgccctcctgcag
ctgatgatcggagtgcccctggagatggtgcatggtctcctccgcatcagcctgctctac
ctggcgggtgtgctggcaggttccctgactgtctccatcacggacatgcgggcccctgtg
gtggggggctctggaggggtctatgccctgtgctcagcacacctggccaacgttgtcatg
aactgggctgggatgaggtgtccctacaagctgctgaggatggtgctggccctggtgtgc
atgagctccgaggtgggccgggccgtgtggctgcgcttctccccaccactgccctcctca
ggcccacagcccagcttcatggcacacctggctggcgcagtggtgggggtgagcatgggc
ctcaccatcctgcgcagttacgaggagcgcctacaggaccagtgcggctggtgggtggtc
ctgctcgcctatggcactttcctgctcttcgccatcttctggaacatctttgcctatgac
ctgctgggtgcccacatccccccaccgccctga
DBGET
integrated database retrieval system
