Sciurus carolinensis (gray squirrel): 124970161
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Entry
124970161 CDS
T08117
Name
(RefSeq) tectonin beta-propeller repeat-containing protein 1 isoform X1
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970161
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124970161
Membrane trafficking [BR:
ncar04131
]
Autophagy
Other autophagy associated proteins
Others
124970161
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
124970161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
PH
Motif
Other DBs
NCBI-GeneID:
124970161
NCBI-ProteinID:
XP_047389253
LinkDB
All DBs
Position
18:9934864..9964032
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AA seq
1163 aa
AA seq
DB search
MPTSALWAVDLFGRVYTLSTAGQYWELCKDAQLEFKRVSAATQCCWGIACDNQVYLYMCA
NDVPIRRREEAYENQRWNPMGGFCEKLLPSDRWQWSDVSGLQHRPLDGVALPSPHWEWES
DWYVDENFGGEPTEKGGWTYAIDFPATYTRDKKWNSCVRRRKWIRYRRYKSRDTWAKIPS
KDDPKELPDPFNDLSVGGWEITEEPVGRLSVWAVSLQGKVWYREDVSHSNPEGSSWSLVD
TPGEVVQISCGPHDLLWATLWEGQALVREGINRNNPKGSFWSIVEPPGSENGIMHISVGV
GVVWAVTKDRKVWFRRGVNSHNPCGTSWIEMVGEMTMVNVGLNDQVWGIGCEDRAVYFRQ
GVTPSELSGKTWKAIVAGRECDRSHSGSSSSLLSAGCFFGDEVRVSSDSTSHDTDVSSEV
ERRDLEQPLPRESLDNPRNPKESSALEPGVSRTAGCDEEKACPTEGRGEPAPATGPNEHP
GLASTPAELPWTNIDLKEPKKAPNHSAAGFPETTGLSSLGLFPLGLEEPYGADDHPLWAW
VSGGGCAVEAGSVLKWFTVQSGLSPSVQTLSLSITPAQTAAWRKQIFQQLTERTKRELEN
FRHYEQAVEQSVWVKTGALQWWCDWKPHKWVDVRVALEQFTGHDGARDSILFIYYVVHEE
KKYLHVFLNEVTVLVPVLNEAKHSFALYTPERTRQRWPVRLAAATEQDMNDWLALLSLSC
CESRRVHGRPSPQAIWSITCKGDVFVSEPSPDLEAHEHPLPCDQMFWRQMGGHLRVVEAN
SRGVVWGIGYDHTAWVYTGGYGGGCFQGLASSTSNIYTQSDVKSVYIYENQRWNPVTGYT
SRGLPTDRYMWSDATGLQECTKAGTKPPSLQWTWVSDWHVDFSIPGGTDQEGWQYASDFP
ASYHGYKTMKDFVRRRCWARKCKLVTSGPWLEVAPIALGDVSVIPESPEAEGCQHNVALW
AVSDKGDVLCRLGVSELNPAGSSWLHVGTDQPFASVSIGACYQVWAVARDGSAFYRGSVS
PSQPAGDCWYHIPPPPKQRLSQVSVGQTSVYALDENGNLWYRGGITPSYPQGSSWEHVSN
NVRRVSVGPLDQVWVIANKVQGSHGLSRGTVCHRTGVQPQEPKGQGWDYGIGGGWDHISV
RANATKAIRSVSQEQEARGPVCC
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcccacctcagcgctgtgggcggtggacctctttgggagagtgtacactctctccacg
gctggccagtactgggaactgtgcaaggatgcccagctggagttcaagcgcgtcagtgcg
gccacgcagtgctgctggggcattgcctgcgacaaccaggtctatttgtacatgtgcgcc
aacgatgtccccatccgccgccgagaggaggcctatgagaatcagcgctggaaccccatg
ggtggcttctgcgagaagctcctgccgagtgaccgctggcagtggagtgacgtgagtggg
ctccaacaccggccgctggatggggtggcgctgccctcgccacactgggagtgggagtcg
gactggtacgtggatgagaattttggaggggaacccaccgagaaagggggctggacgtat
gccattgactttcccgccacctacacgagagacaagaagtggaattcgtgtgtgcggcgg
cggaagtggatccggtacaggagatacaagtcccgggacacctgggccaagatcccctca
aaggatgaccccaaggaactccctgaccccttcaatgacctctctgtcggtgggtgggag
attacagaggagcctgtgggccgcctgtctgtctgggctgtgtctctgcaaggaaaggtg
tggtacagagaggacgtcagccactccaacccggaaggctcctcatggtccctggtggac
acccccggagaggtggtccagatcagctgtgggccccacgacctcctgtgggccaccctc
tgggaggggcaggcgctggtccgggaaggaatcaacaggaacaaccccaaaggaagtttc
tggtccatagtggagcctcctgggtctgaaaatgggatcatgcacatctccgtgggagtc
ggcgtggtctgggctgtcactaaagaccggaaagtgtggttccgaagaggtgtcaactct
cacaacccctgtggcaccagctggatcgagatggttggagagatgaccatggtgaacgtg
gggctcaacgaccaggtctggggcattggctgtgaggaccgagctgtatacttccggcag
ggtgtcacccccagcgagctcagtgggaagacatggaaggccatcgtcgcaggccgcgag
tgtgaccggtcccactctggcagctcgtcaagccttctcagtgctggctgcttctttggt
gatgaggtgagggtcagtagtgactctacatcccatgacactgacgtttcttcagaagtt
gagagacgggaccttgagcagcctctccccagagagtctttggacaatcccaggaacccc
aaggagagctcagccttggaacctggggtcagcaggactgcaggttgcgatgaggagaag
gcctgcccaactgagggcagaggggagcctgctccggccactggtcccaatgagcaccct
ggcctggcctccaccccagctgagctgccctggaccaacattgacctgaaggagcccaag
aaggcacccaaccactcagctgctggctttcctgagaccaccggcctctcctcactgggg
ctcttccccctgggcttggaggagccctacggggcggatgaccacccactgtgggcctgg
gtgtcaggaggtggctgtgcagtggaggcaggctccgtgctcaagtggttcactgtccag
tctggcctgtctccctcagtgcagacgctgtccctgtccatcacgccagcccaaactgcc
gcctggaggaagcagatcttccagcagctcacggaaaggaccaagcgggagctggagaac
ttcaggcattacgaacaggccgtggagcagtcggtgtgggtgaagaccggggccctgcag
tggtggtgtgactggaagccccacaagtgggtggacgtccgcgtggccctggagcagttc
acggggcacgatggggctcgagacagcatcctcttcatctactacgtggtccacgaggag
aagaagtaccttcacgtgttcctcaatgaggtgacagtgttggtcccagtgctcaacgag
gccaagcactcctttgccctgtacacccccgagaggacacggcagaggtggccggtgcgc
ctggctgctgccaccgagcaggacatgaatgactggctcgccctgctcagcctgtcctgc
tgtgagagccggcgggtccacggccgcccatccccacaggccatctggtccatcacctgc
aagggagacgtctttgtgagtgagcccagcccagacctggaggcccacgagcacccactg
ccctgtgaccagatgttctggcggcagatgggaggccacctgcgggtggtggaggccaat
agccgtggcgtggtatggggcatcggctacgaccacacggcctgggtgtatacaggtggc
tatggcggaggctgcttccaaggcctggccagcagcaccagcaacatctacacacagtcg
gacgtgaagagcgtctacatctatgagaaccagcgctggaaccccgtcacaggctacacc
agcaggggtctgcccactgaccggtacatgtggagcgatgccactgggctgcaggaatgc
accaaggctggcacaaagcccccgtccctgcagtggacctgggtctctgactggcacgtg
gacttcagcatcccagggggcacagaccaggagggctggcagtacgccagtgacttccct
gcctcataccacgggtacaaaaccatgaaggattttgtcaggagaaggtgctgggccaga
aaatgcaagctggtgaccagtgggccctggctggaggtggctcccatcgccctcggggac
gtgtccgtcatcccagagagcccagaggctgaggggtgccagcacaatgtcgccctctgg
gccgtcagtgacaagggggatgtgctgtgccgcctgggcgtgtctgagctcaaccctgcg
ggttcctcctggctacacgttggcacagatcagcccttcgcctctgtctccattggggcc
tgctaccaagtgtgggctgtggccagggatggctctgctttctacaggggctccgtgtcc
ccctcccagccagccggtgactgctggtaccacatcccacctcctcccaaacagagactg
tcccaggtgtctgtcgggcagacgtctgtgtacgccctggatgagaatgggaacctttgg
taccgcggagggatcacgcccagctacccgcagggctccagctgggagcacgtgtccaac
aacgtgcgcagagtgtccgtggggcctctggaccaggtctgggttattgccaacaaagtc
caggggagccatggcctgagccggggaacggtgtgtcaccgcacaggcgtgcagccccaa
gagcccaaggggcagggctgggactacggcattgggggaggctgggaccacatctctgtc
cgggccaatgccaccaaggccatccggagtgtgtcccaggaacaggaggctcgtggccct
gtctgctgctga
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