Sciurus carolinensis (gray squirrel): 124970190
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Entry
124970190 CDS
T08117
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124970190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124970190
03036 Chromosome and associated proteins [BR:
ncar03036
]
124970190
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124970190
Coactivators
SAGA/TFTC/STAGA complex
124970190
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124970190
STAGA complex
124970190
TFTC complex
124970190
SAGA complex
124970190
SLIK complex
124970190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
124970190
NCBI-ProteinID:
XP_047389314
LinkDB
All DBs
Position
18:8171961..8178316
Genome browser
AA seq
678 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGAAPADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLHPPPDNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTTPPSTAPTGP
GSVQKYIVVSLPPAGEGKGGPPSHPSPVPPSSSSPSPLGGSALCGGKQETGDSPPPAPGT
PKANGSQPPGSGSPQPVP
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaagctgaagctcagcaatactgtgctgccttcagagtcgatgaag
gttgtggctgaatccatgggcattgctcagattcaggaggagacctgccagctactaaca
gatgaggtcagctaccgtatcaaggagattgcacaggatgccttgaagttcatgcacatg
gggaagcggcagaagctcaccaccagtgatattgactacgcgctgaagctaaagaatgtt
gagccactctacggcttccatgctcaggaatttattccttttcgttttgcctctggtggg
ggtcgggagctttacttctacgaggagaaggaggttgatctgagtgacatcatcaatacc
cctctgcctcgggtgcccctggatgtctgcctgaaagctcattggctgagtattgaaggc
tgccagccagctataccagagaatccacctccagctcccaaagagcagcagaaggccgaa
gccacagaacccctgaagtcagcaaaaccaggccaggaggaagatggaccactgaaaggc
aaaggtcaaggggctgccccagctgatggcaaagggaaagagaagaaggcacctcccttg
ctggagggggcccctctgcgcttgaagccccgcagcatccatgagctgtctgtggagcag
cagctgtactacaaggagatcactgaggcctgcgtggggtcgtgtgaggccaagagagcg
gaagctctgcagagcattgccacggacccagggctctatcagatgctgccacggttcagt
accttcatctctgagggggtccgtgtgaatgtggttcagaacaacctggccctgcttatc
tacctgatgcgcatggtgaaggcgctaatggacaaccctacactctacctagaaaaatat
gtgcatgaacttattccagccgtgatgacctgcatcgtgagcagacagttgtgcctgcga
cctgatgtggacaatcactgggcactccgggactttgctgcccgcctggtggcccagata
tgcaagcatttcagcacaaccactaacaatattcagtcccggattactaagaccttcacc
aagagctgggtggatgagaagactccctggacaactcgttacggctccattgcaggcctg
gcagagctgggacatgatgtgattaagactctgatcctgccacggctgcagcaggaaggg
gagcgaatccgcagcgtgctggacggccctgtgctgagcaacattgaccgcatcggagct
gatcacgtgcagagccttctcctgaaacactgtgcccctgtactggctaagctgcacccg
ccacctgacaatcaggatgcctatcgggcagaatttgggtcccttgggcccctcctctgc
tcccatgtggtcaaggcccgggcccaggctgctctacaggcacagcaggtcaacaggacc
acactgaccatcacacagccccgacccacgctgaccctctcacaggcccctcagcctggc
cctcggacccctggcttactgaaggtccctggctccatcgcactgcccgtccagacgctg
gtgtctgctcgagctgctgccccacctcagccttctcctcctccaaccaagtttatcgta
atgtcctcatcctccagtgcctcatccacccagcaggtcctgtccctcagcacctcagcc
cctggctcaggctccaccactacctctccagtcaccaccacagtccccagtgtgcagccc
attgtcaagctggtctccactgctaccaccacacctcctagcaccgcccccaccggccct
ggcagcgtccagaagtacattgtcgtctcgctccccccagcaggggagggcaaaggaggc
cccccatcccatccctctccagttcctccctcatcatcttccccctccccactcgggggc
agtgccctctgtggagggaaacaggaaactggggacagcccccccccagctccagggact
ccaaaggctaatggctcccagccccctggatcaggctcccctcagcctgttccctga
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integrated database retrieval system
