KEGG   Sciurus carolinensis (gray squirrel): 124970317
Entry
124970317         CDS       T08117                                 
Name
(RefSeq) linker for activation of T-cells family member 1-like isoform X1
  KO
K07362  linker for activation of T cells family member 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04014  Ras signaling pathway
ncar04015  Rap1 signaling pathway
ncar04064  NF-kappa B signaling pathway
ncar04650  Natural killer cell mediated cytotoxicity
ncar04658  Th1 and Th2 cell differentiation
ncar04659  Th17 cell differentiation
ncar04660  T cell receptor signaling pathway
ncar04664  Fc epsilon RI signaling pathway
ncar04666  Fc gamma R-mediated phagocytosis
ncar05135  Yersinia infection
ncar05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    124970317
   04015 Rap1 signaling pathway
    124970317
   04064 NF-kappa B signaling pathway
    124970317
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    124970317
   04660 T cell receptor signaling pathway
    124970317
   04658 Th1 and Th2 cell differentiation
    124970317
   04659 Th17 cell differentiation
    124970317
   04664 Fc epsilon RI signaling pathway
    124970317
   04666 Fc gamma R-mediated phagocytosis
    124970317
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    124970317
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    124970317
SSDB
Motif
Pfam: LAT DUF6541
Other DBs
NCBI-GeneID: 124970317
NCBI-ProteinID: XP_047389533
LinkDB
Position
18:20693222..20698750
AA seq 254 aa
MEVDGLTPYMLGLLLLPLLAMLLMALCVRCHEPPGESVCRPPRGWGWVLLATYPSCVFPA
SSNPTSILIKPSYMPVPWPPATSYPPVISYPPPSQPDLLPIPRSPQPPGGSHRMPSSRQD
SDGANSMASYENQEPACEDADEDDDEDDYHNPGYLVVLPDCTPATSTAVPSAPVPSEPGL
RDSAFSSELVEDYVNVPESGESAEASLDGSREYVNVSQELEAEARARPAPLSSQEMGDEE
EEGPPDYENLQELN
NT seq 765 nt   +upstreamnt  +downstreamnt
atggaggtggacggcctgaccccctacatgctgggcctcctgctgctgcccctcctggcc
atgctgctgatggccctgtgcgtgcgttgccacgagcctcctggtgagtctgtgtgccgc
cccccacgcggctggggctgggttctcttggccacataccccagctgtgtctttcctgcc
agttcaaacccaacgagcatcctgatcaaaccttcctacatgcctgttccctggccaccc
gccacctcctacccacctgttatctcctacccacccccgagccagccagacctgctcccc
atcccgagatccccacagccccctgggggttcccaccggatgccatcttcccgacaggat
tcagatggtgctaacagtatggcgagctacgagaatcaggagccggcctgcgaggacgca
gatgaagatgatgatgaggatgactaccacaaccccggctacctggtggtgcttcctgac
tgcaccccggccactagcactgctgtcccctcagctcctgtgcccagtgagcctggcctc
cgtgacagtgccttctccagtgagttagtggaagattacgtgaacgttcctgagagcgga
gagagcgcagaggcgtctctggatgggagccgggagtacgtgaatgtgtcccaggagctg
gaggcggaggccagagccaggcctgctcccctgagctcccaggaaatgggggatgaagaa
gaagaggggcccccggactatgagaacctgcaggagcttaactga

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