Sciurus carolinensis (gray squirrel): 124970356
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Entry
124970356 CDS
T08117
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124970356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124970356
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124970356
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124970356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-UDP
zf-LITAF-like
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
124970356
NCBI-ProteinID:
XP_047389599
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All DBs
Position
18:6336157..6369242
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AA seq
619 aa
AA seq
DB search
MAMAPSPSLAQVYTSPVAVAVWEWQDGLGTWHPYSATVCSYIEQQFVQQKGQRFGLGSLA
HSIPLGQADPALAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAAGRGITWEWLSDDGS
WTAYEASVCDYLEQQVARGTQLVDLAPLGYNYTVNCTTHTQTNKTSSFCRSVRRQAGPPY
PVTTIIAPPGHNGVACSCHQCLHGSGTGPVSGRYRHSMTNLPAYPGPQASHRTALVFGAH
QAFAPYNKPSLSGARSAPRLNTTNPWGGAPPALGSQPFFRSSLSHLGPQLLPPGPSTSGG
ASASLPSGPSSSPGSIPATVPMQMPKPSRVQQALAGMTSVLMSAIGLPVCFSRAPQPASP
PASCLASKSHSSVKRLRRLAVKEGAPKPEPEQVIRSYTEELKTPPDEDCIICMEKLSATS
GYGDVTDSQTLGPTAAGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQ
PRGKMEVFRFQVSLPGHEDCGTILIVYNIPHGIQGPEHPNPGKPFTARGFPRQCYLPDNV
QGRKVLELLKVAWKRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNVTGHGYPDPNYLQ
NVLAELAAQGVTEDCLEQQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccccaagcccttccttggcacaggtgtacaccagccctgtggcagtggct
gtgtgggaatggcaggatgggctggggacctggcacccctacagcgccaccgtctgtagc
tacattgaacaacagttcgtccagcagaagggccagcggttcgggctggggagcctggcc
cacagcatccctttaggccaggctgaccctgcactggccccttatattatcgacctcccc
agctggacccagttccgccaggacactggcaccatgcgggccgtgcgcaggcacctcttc
ccgcagcactcagctgccggccggggcatcacctgggagtggctgagtgacgacggctcc
tggactgcctacgaagccagtgtctgtgactatctggagcagcaggtggccaggggcacc
cagcttgtggacttggcccccctgggctacaactacactgtcaactgcaccacccacacg
cagaccaacaagacttccagcttctgccggagcgtgcggcgccaggcagggccgccttac
ccggtgaccaccatcatcgccccacccggccacaacggagtcgcttgctcttgccaccag
tgcctccacggcagcggaactggccctgtgtcaggccgctaccgccactccatgactaac
ctccctgcgtaccctgggccccaggcctcccacaggactgcccttgtctttggggcccac
caggccttcgccccgtacaacaaaccctctctctccggggccaggtctgcaccccggctg
aacacgaccaacccctggggcggggcacctcccgccctggggagccagcccttcttccgc
tccagcctctcccacctgggaccgcagctcctgccccccggaccgtccacttcaggtgga
gccagtgcctccctccccagcggtccctccagcagccctgggagcatccccgccactgtg
cccatgcagatgccaaagcccagcagggtccagcaagcgcttgcaggcatgacaagtgtg
ctgatgtcggccattggactccctgtgtgttttagccgcgcgccccagcctgccagccct
cccgcctcctgtttggcctctaagagccacagctcagttaagagactgaggagactggcc
gtgaaagaaggggctccaaagccagagccagagcaggtgatcagaagctacactgaggag
ctgaagacacccccagatgaggactgcatcatctgcatggagaaactgtctgcgacgtct
gggtacggcgacgtgaccgacagccagaccctggggcccacggccgcgggccgcctcacc
aagtgcagccacgccttccacctgctgtgcctgctggccatgtactgcaacgggaacaag
gacgggagcttgcagtgtccttcctgcaaaaccatctatggggagaagactgggacgcag
ccccgggggaagatggaggtgttcaggttccaggtgtcactccctggccacgaggactgt
gggacgatactcatagtgtacaacattccgcacggcattcagggccctgagcaccccaac
ccaggaaagccattcaccgccagagggtttccccgccagtgctaccttccggacaatgtc
cagggtcgcaaggtcctggagctcttgaaggtggcctggaagaggcgacttatcttcaca
gttgggacgtcgagcactacgggtgagacggacacagtggtgtggaacgagatccaccac
aagacagagatggaccgcaacgtgacaggccacggctaccccgaccccaactacctgcag
aacgtgctggccgagctggccgcccagggcgtgaccgaggactgcctggagcagcagtga
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