KEGG   Sciurus carolinensis (gray squirrel): 124970410
Entry
124970410         CDS       T08117                                 
Name
(RefSeq) RNA-binding protein MEX3A
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124970410
   04121 Ubiquitin system [BR:ncar04121]
    124970410
Enzymes [BR:ncar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124970410
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124970410
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124970410
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_2 zf-C3HC4 zf-C3HC4_2 RING_XB3-XBAT31 Prok-RING_4
Other DBs
NCBI-GeneID: 124970410
NCBI-ProteinID: XP_047389740
LinkDB
Position
1:94032917..94038461
AA seq 520 aa
MPSLVVSGIMERNGGFGELGCFGGSAKDRGLLEDERALQLALDQLCLLGLGEPPAPTAGE
DGGGGGGGAPAQPAAPPQPAPPPPPAAPPAAPTAAPAAQTPQPPTAPKGASDAKLCALYK
EAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVT
GRREDVATARREIISAAEHFSMIRASRNKSGAAFGVAPALPGQVTIRVRVPYRVVGLVVG
PKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNN
ENDFLAGSPDAALDSRYSDAWRVHPPGCKPLSTFRQNSLGCIGECGVDSGFEAQRLGEQG
GDFGYGGYLFPGYGVGKQDVYYGVAETSPPLWAGQENATPTSVLFSSASSSSSSSAKARA
GPPGAHRSPAPSAGPELAGLPRRPPGEPLQGFSKLGGGGLRSPGGGRDCMVCFESEVTAA
LVPCGHNLFCMECAVRICERTDPECPVCHITATQAIRIFS
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgcctagtctagtggtatctggaataatggaaagaaatgggggctttggagaactagga
tgtttcgggggaagcgctaaggaccgagggctgctggaagacgagcgcgcccttcagctg
gctcttgatcaactctgcctcctgggtttgggggagccccccgcccccacggcgggcgag
gacgggggaggtggggggggcggcgcccccgcgcagccggccgcccccccgcaaccggcc
ccgccgccgccgcccgctgcgcccccggccgccccgacagcggcccccgcggcgcagacg
ccccagccccccaccgcccccaaaggggcgagcgacgccaagctatgcgctctctacaaa
gaggccgagctgcgcctgaagggcagcagcaacaccacggagtgtgtaccggtgcccacc
tctgagcacgtggccgagatcgtgggcagacaaggctgcaagattaaggctctgagggcc
aagaccaacacctacatcaagacaccggttcgaggcgaggagccggtgtttatggtgaca
gggcggcgagaggatgtggccacagcccggcgggaaatcatctcggcagctgagcacttc
tctatgatccgcgcctcccgaaacaagtcaggcgcagcctttggtgtggcccctgctctg
cctggccaggtgaccatccgtgtgcgagtgccctaccgggtagtgggactggtggtgggc
cccaagggggcaaccatcaagcgcatccagcaacagaccaacacgtacattatcacgcca
agccgtgaccgtgacccagtgttcgagatcactggtgccccgggcaatgtggagcgtgcg
cgggaagagatcgagacgcacatcgcagtgcgcactggcaagatccttgagtacaacaat
gaaaacgacttcctggcggggagccccgacgccgcacttgatagccgctactcagacgcc
tggcgggtacacccgccaggctgcaagccactctccaccttcaggcagaacagtctgggc
tgcatcggcgagtgtggagtggactctggctttgaggcccagcgcctgggcgagcaaggc
ggggattttggctacggcgggtacttgtttccgggctatggcgtgggcaagcaggacgtg
tactacggcgtggccgagactagccccccgctgtgggcgggccaggagaatgccacgccc
acctcggtgctcttctcctccgcctcctcatcctcctcctcttccgccaaggcccgggct
gggcctcccggcgcacatcgctctcctgccccctctgcaggacccgagctggccggactt
cccaggcgcccgccgggagaaccgctccaaggcttctctaaacttgggggaggcggccta
cggagcccgggtggtgggcgagattgcatggtatgctttgagagcgaagtgactgccgcc
cttgtgccctgcggacacaacctgttctgcatggagtgtgcagtacgcatctgcgagagg
acggatccggagtgtcccgtctgccacatcacagccacgcaagccatccgaatattctct
taa

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