Sciurus carolinensis (gray squirrel): 124970416
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Entry
124970416 CDS
T08117
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124970416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124970416
03012 Translation factors [BR:
ncar03012
]
124970416
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124970416
Translation factors [BR:
ncar03012
]
Eukaryotic type
Release factors
124970416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124970416
NCBI-ProteinID:
XP_047389707
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All DBs
Position
18:32483761..32516043
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AA seq
653 aa
AA seq
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MDPGSGGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGPLAAAAEAQREH
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPASAGAASNLGAGGPSAPVEPSQ
EEQSLCEGSNSSVSMELSEPVGKTISDHINTVIWNCDCPDLRFKLENGETEMSPEESWEH
KEEISEAEPGGGDARPPEESAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAG
KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAY
FETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML
AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG
ANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSI
CKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNL
CHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRF
VKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagcggcggcggcggcggcggcggtggtggcggcggcgggagcagcagc
ggcagcagcagcagcgactcggcacccgactgctgggaccaggcggacatggaggccccc
gggccgggcccgtgcggcggcggccccttggcggcggcggccgaggcccagcgtgagcac
ctcagcgcggccttcagccggcagctcaacgtcaacgccaaacccttcgtgcccaacgtc
catgccgccgagttcgtgccgtccttcctgcgcggcccggcccagccgccgccagcctcc
gccggcgccgccagcaacctcggcgcgggaggcccctcggcacctgtggaaccctctcaa
gaggaacagtcattgtgtgaaggttcaaattcatctgttagcatggaactttcagaacct
gttggtaagacaatttctgaccatattaatacagtaatatggaattgtgactgtccagat
ttaaggtttaaattagaaaatggagagacagaaatgtccccagaagaatcatgggagcac
aaagaagaaataagtgaagcagaaccagggggtggagatgcaaggccacccgaggaaagt
gcccaagaaatgatggaggaggaagaggaaataccaaaacctaaatctgtggttgcacca
ccaggtgctcccaaaaaagaacatgtaaatgtagtattcattgggcatgtagatgctggc
aagtcaaccattggaggacaaataatgtatttgactggaatggttgacaaaaggacactt
gaaaaatatgaaagagaagctaaagaaaaaaacagagaaacttggtacttatcttgggcc
ttagacacaaatcaggaagaacgggacaaaggtaaaacagtagaagtgggtcgtgcctat
tttgaaacagaaaagaagcatttcacaattctagatgcccctggccacaagagttttgtc
ccaaatatgattggtggtgcctctcaggctgatctggctgtgctggtgatctcagccagg
aaaggagagtttgaaactggctttgaaaaaggaggacaaacgagagaacatgcaatgttg
gcaaaaacggcaggtgtaaaacacttaattgtgcttattaataagatggatgatccaaca
gtaaattggagcaatgagagatacgaagaatgtaaagagaaactagtgccatttttgaaa
aaagttggcttcaatcccaaaaaggacattcactttatgccctgctcaggactgactgga
gcaaatctcaaagagcaatcagatttctgtccttggtacattggattaccatttattcca
tatctggataatttgccaaacttcaataggtcggttgatggaccaatcaggctgccaatt
gtggataagtacaaggatatgggcactgtggtcctgggaaagctggaatcaggatctatt
tgtaaaggccagcaacttgtgatgatgccaaataagcacaatgtggaagttcttggaata
ctttctgatgatgtagaaacagattctgtagcacctggtgaaaacctcaaaatcagactc
aaaggaattgaagaagaggagattcttccaggattcatactttgtgatcctaataacctt
tgtcattctggacgcacatttgatgcccagatagtgattatagagcacaaatccatcatc
tgcccagggtataatgcggtgctgcatattcatacctgtattgaggaagtcgaaataaca
gccttaatctgcttggtagacaaaaaatcaggagaaaaaagtaagactcgaccccgtttt
gtaaagcaagatcaagtatgcattgcccgcttaaggacagcaggaaccatctgccttgag
acctttaaagacttccctcaaatgggtcgtttcactttaagagatgagggtaagaccatt
gcaattggaaaagttctgaaactggttcccgagaaagactaa
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