Sciurus carolinensis (gray squirrel): 124970419
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Entry
124970419 CDS
T08117
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124970419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124970419
03012 Translation factors [BR:
ncar03012
]
124970419
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124970419
Translation factors [BR:
ncar03012
]
Eukaryotic type
Release factors
124970419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
124970419
NCBI-ProteinID:
XP_047389713
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Position
18:complement(38900172..38902346)
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AA seq
415 aa
AA seq
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MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQFSQVAKMLADEFGTAS
IIKSRVNRISVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKQHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIKLSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDK
ETGQQHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagtgctgctgacaggaacgtggagatctggaagatcaagaagctc
attaagagcttggaggcggcccgcggcaatggcaccagcatgatatcattgatcattcct
cccaaagaccagttttcacaagtggcaaaaatgttagcagatgagtttggaactgcatct
atcattaagtcacgagtaaaccgcatttcagtcctgggagccattacatctgtacaacaa
agactcaaactttataacaaagtacctccaaatggtctggttgtttactgtggaacaatt
gtaacagaagaaggaaaggaaaagaaagtcaacattgattttgaacctttcaaaccaatt
aatacatcattgtatttgtgtgacaacaaattccacacagaggctcttacagcactactt
tcagatgacagcaaatttggcttcattgtaatagatggcagtggtgcactttttggcaca
ctccaaggaaacacaagagaagtcttgcacaaattcactgtggatctcccaaagaaacat
ggtagaggaggtcagtcagccttgcgttttgcccgtttaagaatggaaaaacaacataac
tatgttcggaaagtagcagagactgctgtgcagctgtttatttctggggacaaagtgaat
gtggctggtctcgttttagctggatcagctgactttaaaactgaactaagtcaatctgat
atgtttgatcagaggttgcaatcaaaagttttaaaattagttgatatatcctatggtggt
gaaaatggattcaaccaagctattaagttatctactgaagtcctctccaacgtgaaattc
attcaagagaagaaattaataggacgatactttgatgaaattagtcaggacacgggcaag
tactgctttggtgttgaagatacactaaaggctttggaaatgggcgctgtagagattcta
atagtctatgaaaatctggatataatgagatacgttcttcattgccaaggcacagaagag
gagaaaattctctatttaactccagaacaagagaaggataaatctcatttcacagacaaa
gagacaggacagcaacatgagctgattgagagcatgcccctcttggaatggtttgctaat
aactataaaaaatttggagctacattggaaattgtcacagataagtcacaagaaggatcc
caatttgtgaaaggatttggtggaattggaggtatcttgcggtactga
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