KEGG   Sciurus carolinensis (gray squirrel): 124970430
Entry
124970430         CDS       T08117                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03020  RNA polymerase
ncar04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124970430
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    124970430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncar03021]
    124970430
Transcription machinery [BR:ncar03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     124970430
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 124970430
NCBI-ProteinID: XP_047389734
LinkDB
Position
18:complement(25504849..25530411)
AA seq 710 aa
MANEEDDPVVQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDSPHLSAKIKPKQQKVELEM
AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYR
QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEEDVKQITVRFSRP
ESEQARQRRVQSYEFLQKKQAEEPWVHLHYHGLRDSRSEHERQYLLCQGSSGVENTELVK
SPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSL
LGPSVDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKF
TQSRWVVRKEVAAVTKLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQH
MLWTGIQAKLEKVYNLVKETMPKKSDGQSGPAGLVSGDQRVQVAKTKAQQNHAFLERELQ
RRKEQMRVSTVLPAVQIKEEPLSEEGEDDEQEAEDEEEPMDTSPSGGLNSRLANGLPAGR
AAGGDSFNGHPLPGCASTPVARELRAFVESTFQRQFVLTLSELKRLFNLHLASLPPGHTL
FSGISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDISDQHRQVLLEIFS
KNYRVRRNMIQSRLTQECGEDLSKQEVDKVLKDCCVSYGGMWYLKGTVQS
NT seq 2133 nt   +upstreamnt  +downstreamnt
atggccaatgaagaggatgacccagtggttcaggagatcgatgtgtacttggccaaaagt
ctcgcagagaagctctatctgtttcagtaccccgtgcgtccagcctcgatgacctacgat
gacagtccacatctctcagccaagatcaagcccaaacagcagaaggtagagcttgagatg
gccatcgacaccctgaatcccaactattgccgcagcaaaggagagcagatcgcgttgaac
gtggatggcgcctgtgccgacgagaccagcacgtactcctcgaagctgatggacaagcag
accttctgctcttcccagaccaccagtaacacatcccgctacgcagctgcgctctacagg
caaggtgagctccacctgacacctttacatggcatcctacagctgcggcccagcttctcc
tacctggataaggcagacgccaagcaccgggagagggaggcggccaatgaggctggggac
tcttcacaggatgaggcagaagaagatgttaagcagatcacggtaagattctcccggccg
gagtcggagcaggcccgccagcgccgcgtgcagtcctacgagttcctgcagaagaagcag
gcggaggagccctgggtccacctgcactaccatggcctgagggacagccgctccgagcac
gagcgccagtacctgctgtgccagggttccagtggggtggagaacaccgagctcgtcaag
tcacccagcgagtacctgatgatgctgatgccacccagccaggaggaggagaaagacaag
cccgtggcccccagcaatgtcctgtccatggcccagctgcgcacactgcccctggctgac
caaattaagatcctgatgaagaatgtgaaggtcatgccttttgccaacttgatgagcctc
ctgggcccctctgtggactccgtggctgttctgcgtggcatccagaaggtggcgatgtta
gtccaaggaaactgggtggtgaagagtgacatcctgtaccccaaggactcatcgagccct
cacagcggcgtgccggccgaggtgctctgtaggggccgagactttgttatgtggaagttc
acacagagccgttgggtggtaaggaaagaggtggcggcagtgaccaaactctgcgccgag
gacgtgaaggactttctggaacacatggccgtagtgaggatcaacaaaggctgggagttc
attctgccctacgatggggagttcatcaagaagcatccagatgtggttcagcggcagcac
atgctgtggacgggcatccaggccaaattagaaaaagtctataatcttgtaaaggaaacc
atgccaaagaagtcggatggacaatcaggacctgcagggctggtctctggggaccagcgg
gtccaagtagccaaaaccaaggcccagcagaaccatgccttcctggagcgggagctgcag
aggcggaaggagcagatgcgggtgtccacggttctgcccgctgtgcagatcaaggaggag
cccctgagtgaggagggagaggacgacgagcaggaagcagaggacgaggaggaacccatg
gacacttcacccagtggtggcctcaacagtaggctggccaatgggctgcctgctgggcgg
gcagcaggcggggacagctttaatgggcacccgctcccaggctgtgccagcacccctgtg
gcccgggaactgagagccttcgtggagtccacctttcagagacagtttgtcctcacgctg
agtgaactcaagcgcctcttcaacctgcacctggccagcctgcccccgggccacacgctc
ttcagtggcatctcggatcgcatgctgcaggacacggtgctggccgctggctgcaagcag
atactggtgccttttcccccacagactgctgcttccccggatgagcagaaggtgtttgcc
ctctgggagtctggagacataagcgatcagcatcgacaggttttgcttgaaattttttcc
aaaaattaccgggtacgccggaacatgatccagtctcggctgactcaagagtgtggagaa
gatctaagcaaacaggaggtggataaagtgctaaaggactgctgtgtaagctatggtggc
atgtggtaccttaaagggacagtacagtcttga

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