Sciurus carolinensis (gray squirrel): 124970509
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Entry
124970509 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 18-like
KO
K10284
F-box and leucine-rich repeat protein 18
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124970509
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124970509
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Gene cluster
GFIT
Motif
Pfam:
LRR_FBXL18
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
124970509
NCBI-ProteinID:
XP_047389850
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Position
18:complement(12750100..12791405)
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AA seq
718 aa
AA seq
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MASPGEDVSNDDDXHPPAAADVAGGAHLLGFSDEILLHILSHVPSTDLVLNVRRTCRKLA
ALCLDKSLVHTVLLQKDYQASEDKVKQLVKEIGREIQQLNMAGCYWLSGSTIEHVARCRG
LVKVNLSGCHLTSLRLSKVLSALQHLRSLAIDVSPGFDASQLSSECKATLTRVRELKQTL
FTPSYGVVPCCASLQKLLLYFEILDRTREGAVLSGQLMVGQSNVPHYQNLRVFYARLAPG
YINQEVVRLYLAVLSDRTPENLHAFLISVPGSFAESGATKNLLDSMARNVALDALQLPKS
WLNGSSLLQHMKFNNPFYFSFSRCTLSGGHLIQRVINGGKDLRSLASLNLSGCVHCLSPD
SLLRKAEDAIDSSILETLVAACCNLRHLNLSAAHHHSAEGPGGHLCQLLARLRHLRSLSL
PVCSVADAAAWADRVPVQPVMRAVPRGFGKKVRIGVQTCPSPFLGQTAPQPSSVFWSLLK
NLPFLEHLELIGSNFSSAMPRNEPAIRNSLPPCSRAQNVGDSEVAAIGQLAFLRHLTLAQ
LPGILTGSGLVSIGLQCQQLQSLSLANLGMMGKVVYMPALSDMLKHCRRLKDLRLEQPYF
SANAQFFQALSQCTSLQRLCLVSRSGSLQPDAVLAFMARCPHVVVCHMFTGESLATCKNL
QQSLLRSFQAERPALNVVIFPLLHEGLTDVIRDVPMVHLDEITLFKSRVAEEPPNLWW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggccagccccggagaggatgtgtccaatgatgatgatnngcaccccccagcagcagcc
gatgtggcaggtggtgcccacctgctggggttttctgatgagatcctgctgcacatcctg
agccacgtccccagcacagacctggttctgaatgtccgtcgtacctgccggaagctcgca
gccctatgtcttgataagagccttgtccacaccgtgttgctgcagaaggactatcaggcc
agtgaggacaaggtgaagcagctggtgaaggagattggccgggagatccagcagctgaac
atggccggctgctactggctctcaggttccaccatcgagcacgtggcccgctgccgtggc
ctggtgaaagtgaacctctcgggctgccacctgacctccctgcgcctctccaaggtgctc
tcggccctgcagcacctgcgctcgctggccattgacgtgagcccgggcttcgatgccagc
cagctgagcagcgagtgcaaggccacgctgacgcgcgtgcgggaactcaagcagacgctg
ttcacgccctcctatggcgtggtcccctgctgcgccagtctccagaagctgcttctctac
tttgagatcctggaccgcacacgcgagggcgccgtcctctcaggccagctcatggtgggc
cagagcaacgtgccccactaccaaaacctgcgcgtcttctatgcgcgcctggctccgggc
tacatcaaccaggaggtggtgcggctgtatctggcagtgctcagcgaccgcacccccgag
aacctgcatgcctttctcatctctgtcccaggcagcttcgccgagagtggggccaccaag
aacctcctggactccatggcccgcaacgtggccctggatgccctgcagctgcccaagtcc
tggctgaatggctcctccctcctccagcacatgaagttcaacaatcccttttactttagc
ttcagccgctgcacactgtctggtggccacttgatccagcgggtcatcaatggtgggaag
gacctccgcagcctggccagcttgaacctcagtggctgcgtgcactgcctgtctcctgat
tctctgctgcgcaaggcagaggatgctatcgacagcagtatcctggagacgctggtggcc
gcctgctgcaacctgaggcacctgaacctctcggccgcccaccaccacagcgccgagggc
ccaggtgggcacctctgtcagctcctggcccggctgcgccacctgcgctccctgtccctg
cctgtctgctctgttgctgacgcggctgcctgggctgaccgtgtgcctgtccagcctgtg
atgcgtgctgtgccccgtggctttggcaagaaggtgcgcataggcgtgcagacctgcccc
agccccttcttgggccagacggccccccagccttcctccgtgttctggtctctgctgaag
aacctgcccttcctggagcacctcgagctgatcgggtccaacttttcctcggccatgcca
cgcaatgagcctgccatccgcaactccctcccgccctgtagccgggcgcagaacgtcggg
gactcagaagtggctgccatcggccaattggccttcttgcggcatctgacactggcccag
ctgcctggcatcctgacaggctctgggctggtcagcatcggcctgcagtgccagcagctc
cagtccctctcactggccaacctgggcatgatggggaaggtggtctacatgcccgccttg
tcggacatgctgaagcactgcaggcggctgaaggacctcaggctggagcagccctacttc
agcgccaacgcgcagttcttccaggccctgagccagtgcacctcgctgcagcgtctgtgc
ctggtgtcccgcagcggctccctccagcccgatgccgtgctggccttcatggctcgctgc
ccacacgtcgtcgtgtgccacatgttcacgggcgagtccctcgccacctgcaagaacctg
cagcagtcgctcctccgcagttttcaggctgagagacccgcattgaacgtcgtcatcttc
cctctgctccacgagggcctgacagatgtcatccgagatgtgcccatggtacacctggac
gagatcaccttgtttaaaagcagagtggctgaggagcccccaaacctgtggtggtga
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