Sciurus carolinensis (gray squirrel): 124970532
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Entry
124970532 CDS
T08117
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04145
Phagocytosis
ncar05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124970532
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
124970532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124970532
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124970532
04147 Exosome [BR:
ncar04147
]
124970532
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Phagocytosis
Coronins
124970532
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124970532
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124970532
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trimer_CC
DUF1899
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_4
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
DSE1_N
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
CFAP251_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ASA1
Beta-prop_WDR19_1st
PAC11
Beta-prop_WDR41
TRM82_WD
WDR90_beta-prop_4th
CENP-Q
Beta-prop_SCAP
Wtap
CLZ
Beta-prop_DCAF12
DUF2730
Beta-prop_NUP159_NUP214
UbiJ_C
YwqH-like
AKNA
DUF4140
VPA1267
DUF4200
DivIC
DUF7310
BLOC1_2
VPS51_Exo84_N
FlaC_arch
Beta-prop_HPS5
Spc24
ZapB
XhlA
Motif
Other DBs
NCBI-GeneID:
124970532
NCBI-ProteinID:
XP_047389889
LinkDB
All DBs
Position
18:20139481..20145350
Genome browser
AA seq
461 aa
AA seq
DB search
MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFL
VLPLGKTGRVDKNVPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLTLPL
REPVVTLEGHTKRVGIVTWHPTAQNILLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY
SVDWSRDGALICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS
RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE
APFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKCEPIAMTVPRKSDLFQ
EDLYPPTAGPDPALTAEEWLGGQDAGPLLISLKDGYVPPKSRELRVNRGLDSTRRRAVPE
AGGTPSSDAVSRLEEEIRKLQTTVQELQKRLDRLEETVQAK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggcaggtggtccgctccagcaagttccgccacgtgtttggacagccagccaaa
gcagaccaatgctatgaggatgtccgcgtctcacagaccacctgggacagtggcttctgt
gctgtcaaccccaagtttgtggccctgatctgtgaggccagtgggggaggggccttcctg
gtgctgcccctgggtaagactggacgtgtggacaagaacgtgcccacggtctgcggccac
acagcccctgtactggacatcgcctggtgcccacacaatgacaacgtcattgccagtggt
tctgaggactgcacggtcatggtgtgggagatccctgatgggggcctgacgctgcccttg
cgggagcctgtcgtcaccctggagggccacaccaagcgtgtgggcatcgtgacctggcac
cccacagcacagaatatactgctcagtgcaggttgtgacaacgtgatcctggtgtgggac
gtgggcactggggcagctgtgctgacgctgggcccagatgtgcacccggacacaatctac
agcgtggactggagccgcgatggtgccctcatctgcacctcctgccgggacaagcgtgtg
cgcatcatcgagccacgtaaaggcactgtcgtagccgagaaggaccgtccccatgagggg
actcggcctgtacatgctgtgtttgtatcagaagggaagatactgaccacaggcttcagc
cgcatgagtgagcggcaggtggcgctgtgggacacaaagcacctggaggagccactgtcc
ctgcaggagctggacacaagcagtggagtcctgctgcccttctttgatcctgacaccaac
attgtctacctctgtggcaagggtgacagctccatccgctacttcgagatcacctccgag
gccccattcctgcactatctttctatgttcagttccaaggaatcccagcgtggcatgggc
tacatgcccaaacgtggcctggaggtgaacaagtgtgagattgccagattctacaagttg
cacgagcgaaagtgtgagcccatcgccatgacagtgcctagaaagtcggacctgttccag
gaggatctgtacccacccacagcagggcctgaccctgccctcacagctgaggagtggctg
gggggtcaggatgctgggcccctcctcatttccctcaaggatggctacgtaccccccaaa
agtcgggagctgcgggtcaaccggggcctggacagcacacgcaggagggcagtgccagag
gccggtggcactcccagctcggatgctgtgtcccggctggaggaggagataaggaagctg
cagaccacagtgcaggagctgcagaagcgcttggacaggctggaagagacagtccaggcc
aagtag
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