Sciurus carolinensis (gray squirrel): 124970543
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Entry
124970543 CDS
T08117
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124970543
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
124970543
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
124970543
NCBI-ProteinID:
XP_047389906
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All DBs
Position
18:complement(30226500..30258038)
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AA seq
658 aa
AA seq
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MAAQLLHTRLPGEGAASASAVTTLSASRTGISDMIALENEFFNSPPRKTVRFGGTVTEVL
LKYKKGETNDFELLKNQLSDPNIKDDQIINWLLEFRSSIMYLTKDFEQLINILLKLPWLN
RSQTVVEEYLAFLGHLVSAQTVFLRPCLRMIASHFVPPRVIIKEGDIDVSDSDDEDDNLP
ANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
HEILELIIEKLLKLDVNASRQDIEDAEETAAQTGGATDSTEGLFNMDEDEETQPDTKVDP
ERLGQMVHPVAERLDILLSLLLSYIKDVCYVDGKIDNNKTKDLYRDLVTIFDKLLLPTHA
SCHVQFFMFYLCSFKLGFAEAFLEHLWKKLQDPNNPAIIRQAAGNYIGSFLARAKFIPLI
TVKSCLDLLVNWLHIYLNNQDSGTKAFCDVALHGPFYSACQAVFYTFVFRHKQLLSGNLK
EGLRYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKYQLVFCYTIIERNNRQMLPVI
RSTAGGDSVQTCTNPLDTFFPFDPCVLKRSKKFIDPVYQIWEDISAEELQELKKPIRKEM
VEDEDDDFLKGEVPQNDAVIGITPSSFDAHFRSPSSSVGSPPVLYMPGQSPVTSRICD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaactacttcacacgcggttgcctggggagggcgccgcttcggcttcagcg
gtcaccacgctcagcgcgtcgcggactgggatttcagatatgattgcattagagaatgaa
ttcttcaattctcccccaagaaagactgttcgttttggtggaactgtgacagaagtgttg
ctgaaatacaaaaagggtgaaacaaacgattttgagttgttgaagaaccagctgtcagat
ccaaacataaaggatgaccagattattaactggctgctggaattccgctcctctatcatg
tacttgacaaaagactttgagcagcttatcaatattcttttgaaattgccttggttaaat
agaagtcaaacggtggtggaggagtatttggcttttcttggacatcttgtttcagcacag
acagtcttcctcagaccgtgtctcagaatgatcgcttctcattttgtacccccccgagtg
atcattaaggagggtgacatagatgtttcagattctgatgatgaagatgataatcttcct
gcaaattttgatacgtgtcacagagccttgcaaataatagcaagatatgttccatcgaca
ccatggtttcttatgccaatactggtggaaaaatttccatttgttagaaaatcagagaga
acattggagtgttacgttcataacttactaaggataagtgtgtattttccaaccttgaga
catgaaattctggagcttattattgaaaagctgctcaagttggatgtgaatgcatcccgg
caggatatcgaagatgctgaggaaacagcagctcaaactggcggtgccacagattccaca
gaaggattgtttaatatggatgaagatgaagaaactcaacctgataccaaggttgatcca
gagcggcttggccagatggtccatcctgtagctgaacgcctggacatcctgctgtccttg
ctattgtcctacatcaaggacgtctgctatgtggacggtaagatcgataacaacaaaaca
aaggatttgtatcgcgatcttgtaaccatctttgacaaactcctcctgcctacccatgcc
tcctgccatgtacagtttttcatgttttatctctgtagcttcaaattgggatttgcagaa
gcatttttggaacatctctggaaaaaattgcaggatccaaataatcctgccatcatcagg
caagctgctggaaattatattgggagctttttggcaagagctaaatttattcctcttatt
actgtaaaatcatgcctcgaccttttggttaactggttgcacatatacctcaataaccag
gattcaggaacaaaggccttttgtgacgttgctctccatggaccattctattcagcctgc
caagctgtgttctacacttttgtttttagacacaagcagcttttaagtggaaacctgaaa
gaaggtttgaggtatcttcaaagtctcaattttgaacgaatagtaatgagtcagctaaac
cctctgaagatttgcctgccgtcggtggttaacttttttgctgcgatcacaaataaatac
cagctggtcttctgctacaccatcattgagaggaacaatcgccagatgctaccagttatt
agaagcacagcaggaggggactcagtgcagacctgcacaaacccactcgacaccttcttt
cccttcgatccttgtgtactgaagaggtcaaagaaatttattgatcctgtttatcagata
tgggaagacattagtgctgaggagcttcaggagcttaagaaacccattagaaaggagatg
gtggaagatgaagatgatgattttttgaaaggcgaagtaccccagaatgatgctgtgatt
gggatcacaccgagctcctttgatgcccacttccgaagtccttccagtagtgtgggctcc
ccccctgtgttgtacatgccaggccagtcccctgtcacctcgaggatttgtgattga
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