Sciurus carolinensis (gray squirrel): 124970586
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Entry
124970586 CDS
T08117
Name
(RefSeq) chromosome transmission fidelity protein 18 homolog
KO
K11269
chromosome transmission fidelity protein 18
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124970586
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124970586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_5
AAA_22
RuvB_N
Rad17
AAA_16
AAA_33
AAA_14
AAA_25
nSTAND3
DNA_pol3_delta
AAA_18
AAA_30
AAA_19
AAA_28
AAA_17
AAA_24
Zeta_toxin
AAA_7
ABC_tran
IstB_IS21
TniB
Motif
Other DBs
NCBI-GeneID:
124970586
NCBI-ProteinID:
XP_047390009
EnsemblRapid:
ENSSCRG00010021924
LinkDB
All DBs
Position
18:complement(40959444..40967700)
Genome browser
AA seq
961 aa
AA seq
DB search
MEDYEERLPGVEDGFHSQFAAELEVLAELEAATPFPAPSERQQLTFEEAIAGGDVAVRPY
PAGSPGSGKRSTRKREVDAAAGREEPLPPTPKVKRPKLEAVKRLDFRLEREEPLLPDSPP
RDITPPLSPEVPLELWGAGSPDKGPRQALPGTRNPVLRRPPVLEDFINVTSTSGDRAFLV
LHADPTGTGVQSPLLDVQWRGRGQLDLLGVSFSSLKEQVDNERHQRLLEEAQRLSDTLHS
LRPEEEETQPIGGPEEQPTGVQGTSQHCLWVDEFAPKQYTELLSDDFTNRCLLKWLKLWD
VVVFGHERPARKPRPSVEPARIGKEATAPGKWKSHAQVLEEMLEAEVDPSHRPRQKVALL
CGPPGLGKTTLAHVIAKHAGYCVVEMNASDDRSPEAFRVRIEAATQMESVLGAGGKPNCL
VIDEIDGAPTAAISVLLSILNRKGPQEVEPAGPAVPSGGGRRRQAEGALMRPIICICNDQ
FAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRSDPGALAALCEKTDNDIRACI
NTLQFLHGRGRRELSVRDVQTTHVGLKDQRKGLFSVWQEVFQLPRAQRRLVGPGPTLPAH
SLLLGDGDTGSLTLASQRFYHLLRITTSTGEHEKVVQGLFDNFLRLRLRDSSMGAVCTAL
DWLAFDDLLERAAHHGQSFQLLRYLPFLPAAFHVLFASSHVPRITFPSSQQEAQNRMSQM
RNLIQTLVAGIAPATRSQATPQTLVLDTLCLLLDILAPRLRPVSTQLYSAREKQQLSSLV
GTMLAYSLTYRQERMPDGQYLYRLEPNMEEVCRFPDLPARKPLTYQAKQLIAREIEVEKM
RRAEAFARAGHSPQVDQHRPGLEGLLGCSGGGGVKRPAPRSQEQRLEHIMRRAGLEEQPE
RDFFGRVVRRAAAPSTGAEASKKDAAEQLMGTAVGRSQVWFRFHEGVSNAVRRSLYIRDL
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaggactacgaggagcggctgcccggcgtggaggatggcttccacagccagttcgcc
gccgagctcgaggtgctggccgagctggaagcagcgacgccgttcccagcgccctccgag
cgccagcagctcacgttcgaggaggccatcgctggaggggacgtggccgtccgtccctat
ccggctggatctcccgggagcggcaagcgcagcaccaggaagagggaggtggatgccgcc
gccgggagggaagaacccctgccacccacccccaaggtcaaacgacccaagctggaggcg
gtcaagagactggacttcaggctggagagggaggaaccgctgcttcctgactccccgcca
agggacatcacccccccactgagtcctgaggtcccccttgaactgtggggtgctgggtcc
ccagacaaaggtcccaggcaggccttgccaggcacccgcaatcccgttctgaggcggccc
ccagtcttggaggatttcatcaatgtgacatccaccagtggcgaccgggcctttctggtg
ctgcatgctgatcccacaggcacaggggtgcagagccctctcttggatgtccagtggcga
ggccgtggccagctggacctgcttggtgtgtccttcagctccctgaaagagcaggtggac
aatgagcggcaccagcgattgctggaggaggcccagcgactctcagatactctgcacagc
cttaggcctgaggaagaggagacccagcctatagggggcccagaggagcagcccactggt
gtacaaggcacatcccagcactgcctctgggtggatgagtttgcacccaagcagtacaca
gagctgctcagtgatgatttcaccaaccgctgcctccttaagtggctgaaactctgggac
gtggtggtatttggccatgagaggcctgcccggaagcccaggcccagtgtggagccggcc
cggattggcaaggaggccacagcccctggcaagtggaaaagccatgcacaggtgctagag
gagatgctggaggctgaggtggatccaagccatcgcccccggcagaaggtggcgctgctg
tgtgggcccccggggctgggcaagaccacgctggcacacgtgattgcaaaacacgctggg
tactgcgtggtggagatgaacgccagtgacgaccgcagccctgaggccttccgcgttcgc
atcgaggcagccacgcagatggagtcagtgctgggtgccggcggcaagcccaactgtctg
gtcatcgatgagattgacggggcccccacggctgccatcagtgtgctattgagcatcctg
aaccgcaagggtccacaggaggtggagccagcaggcccagctgtgccctcaggtgggggc
cgccggcgccaggcagagggggccctgatgaggcccatcatctgcatctgcaacgaccag
tttgcaccgtctctgcggcagctgaagcagcaggccttcctgctccacttcccacccact
ctgccctcaagactggtgcagcggctccaggaggtctccctgcggcagggcatgcggtct
gaccctggtgcgctggcagccctctgtgagaagaccgacaacgacatccgtgcctgcatc
aacactttgcagttcctgcatgggcggggccggcgggagctgagtgtgcgggatgtgcag
accacccatgttggcctcaaggaccagcgtaagggactattttctgtgtggcaggaggtc
ttccagctgccccgggcccagaggcgacttgtgggcccaggcccaaccctgccagcccac
tcgctcctgctcggtgacggggacacaggctccctcaccctggcctcccagcggttctac
cacctcctgcgcatcaccacctcaacaggcgagcatgagaaggtggtccagggcctgttc
gacaacttcctgcggctccggcttagagactccagcatgggtgctgtgtgcacagccctc
gactggctggcctttgatgacctgctggagcgggctgcccaccacggccagagcttccaa
cttctgcgctacctgcccttcctgcctgcagccttccacgttctctttgcctctagccat
gtgccacggatcaccttccccagcagccagcaggaggcccagaaccggatgagccagatg
aggaacctgatccagacgctggtggcaggcatcgcaccagccacccgcagccaggccacg
ccccagaccctcgtcctggacaccctctgcctgctcctggacatcctcgcgccccgcctg
cggcccgtgagcacacagctgtacagtgcccgcgagaagcagcagctatccagccttgtg
ggcaccatgctggcctacagcctcacctaccgccaggagcgcatgccggacgggcagtat
ctgtacaggctggagccgaacatggaggaggtctgccgcttccctgatctgcctgcccgc
aagcccctcacctaccaggccaagcagctcattgcccgggagatcgaggtggagaagatg
cggcgggcagaggcttttgcccgggctgggcacagcccccaggtggaccagcatcgccca
gggctggaaggtctgctggggtgcagtgggggtggaggggtgaagcggcctgccccacgc
agccaggagcagaggctggagcacatcatgagaagggcaggcctggaggagcagcctgag
agggacttctttggacgtgtggtcaggagagctgcagccccaagcacaggagcggaggcc
tccaagaaggatgcagctgagcagctcatgggcacggcggtgggcaggagtcaggtctgg
ttccgcttccacgagggtgtctccaacgcggtgcggcgcagcctgtacatcagggacctg
ctgtag
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