Sciurus carolinensis (gray squirrel): 124970743
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Entry
124970743 CDS
T08117
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124970743
03015 mRNA surveillance pathway
124970743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124970743
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124970743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124970743
NCBI-ProteinID:
XP_047390227
LinkDB
All DBs
Position
18:39820906..39829945
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AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGTTKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPMRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaag
tccagcactagggctccttctcctaccaaacgcaaggaccgctctgatgagaaatccaag
gatcgctctaaagacaaagggaccaccaaggagtcgagcgagaaggaccgtggcagggat
aagactcgaaaaaggcgcagtgcttccagtggaagcagcagtaccaggtctcggtccagt
tccacctccagctcgggatctagcaccagcacaggctcaagcagtggatccagctcctcc
tctgcatccagccgctccggaagctccagcacatcccgcagctccagttccagcagctcc
tctggatctcctagcccttctcggcgcaggcatgacaacaggcggcgttcccgctccaaa
tccaaaccacctaaaagagatgaaaaggaaaggaaaaggcggagcccttcccctaaaccc
accaaagtgcatattggaaggctcaccaggaatgtgaccaaggatcacatcatggagata
ttttccacctatggaaaaattaaaatgattgacatgcctgtagaaaggatgcatcctcat
ctatccaaaggctacgcatatgtggagtttgagaatccagatgaagctgagaaggcactg
aagcacatggatggaggacaaatcgatggccaggagatcactgctactgctgtgttggcc
ccctggcctaggccacccccccgacgattcagccctcccaggagaatgctgccaccacct
cccatgtggcgtaggtcgcccccacgcatgaggaggaggtcacgctctccaagacgcagg
tcccccatgcgcaggcggtcccgctctcctggccgccgccgccacagaagccgctccagt
tctaactcctcccgataa
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