Sciurus carolinensis (gray squirrel): 124970750
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Entry
124970750 CDS
T08117
Name
(RefSeq) LIM domain kinase 1 isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
ncar04666
Fc gamma R-mediated phagocytosis
ncar04810
Regulation of actin cytoskeleton
ncar05135
Yersinia infection
ncar05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124970750
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
124970750
09158 Development and regeneration
04360 Axon guidance
124970750
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124970750
09171 Infectious disease: bacterial
05135 Yersinia infection
124970750
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncar01001
]
124970750
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124970750
Protein kinases [BR:
ncar01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
124970750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
ABC1
Zn_ribbon_RRN7
Haspin_kinase
RIO1
PDZ_2
APH
Motif
Other DBs
NCBI-GeneID:
124970750
NCBI-ProteinID:
XP_047390248
LinkDB
All DBs
Position
18:complement(5113340..5136055)
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AA seq
647 aa
AA seq
DB search
MRLTLLCCTWREERMGEEGSELPVCASCSQRIYDGQYLQALNADWHADCFRCGECGASLS
HQYYEKDGRLFCRKDYWARYGESCHGCSEHITKGLVMVAGELKYHPECFICRTCGTFIGD
GDTYTLVEHSKLYCGHCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASAHGKRGLSV
SIDPPHGPPGCGAEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEID
LLIQETSRLLQLTLEHDPHDLLAQGPGPEPSPLSSPLHAPSAEVGGSARQKPVLRSCSID
TSPGAGSLASPSSQRKDLGRSESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRE
TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLRFIGVLYKDKRLNFITEYIKGGT
LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENNNVVVADFG
LARLMVDEKTQPEDLRSLKKPDRRKRYTVVGNPYWMAPEMIHGRSYDEKVDVFSFGIVLC
EIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFLKL
EQWLETLRMHLAGHLPLGPQLEQLDRGFWETYRRGESGLPAHPEVPD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgacgctactttgttgcacctggagggaagaacgtatgggagaggaaggaagc
gagttgcccgtgtgtgcgagctgcagccagaggatctatgacggccagtacctccaggcc
ctgaatgctgactggcacgcagactgcttcaggtgcggtgagtgcggggcctccctctcg
caccagtactacgagaaggatgggcggctcttctgcaggaaggactactgggcccgctac
ggcgagtcctgccacgggtgctcggagcacatcaccaaggggctggtcatggtggctggg
gagctgaagtaccaccccgagtgcttcatctgccgcacgtgtgggacctttatcggcgac
ggggacacctacaccctggtggagcactccaagctgtactgtgggcactgctactaccag
actgtggtgactcctgtcatcgagcagatcctgcccgactcccccggctcccacctaccc
cacacagtcaccctggtgtccatcccagcctctgctcatggcaaacgtggtctctctgtc
tccatcgaccccccccacggccctccaggctgtggcgcagaacactcccacactgtccgc
gtccagggagtggacccaggttgcatgagcccagatgtgaagaattccatccatgtggga
gacaggatcctggaaatcaatggcacacccatccgaaatgtgcccctggatgagattgac
ctgctgatccaggagaccagccgcctactgcagctgaccctggagcatgacccccacgac
ctgctagcccaagggccggggcccgagcccagccccctgagctccccgctgcacgctccc
agtgcggaggtgggcggctctgctcggcagaaacccgtcctaaggagctgcagcatcgac
acgtccccgggtgctggctcgctggcctcaccatcctcccagcgcaaggacctgggtcgc
tcggagtccctccgggtggtctgccggccacatcgcatcttccggccatcggacctcatc
catggggaagtgctgggcaagggctgcttcggccaggccatcaaggtgacacaccgggag
acaggcgaggtgatggtgatgaaggagctgattcggttcgacgaggagacccagaggaca
tttctcaaggaggtgaaggtcatgagatgcctggagcaccccaacgtgctcaggttcatc
ggggtgctctacaaggacaagaggctcaacttcatcaccgagtacatcaaggggggcacc
ctgagaggcatcatcaagagcatggacagccagtacccgtggagtcagagggtgagcttt
gccaaggacatcgcatcggggatggcctacctccactccatgaacatcatccaccgcgac
ctcaactcccacaactgcctggtccgcgagaacaacaacgtggtagtggctgacttcggg
ctggcgcggctcatggtggacgagaagactcagcctgaggacctgcgcagcctcaagaag
ccggaccggaggaagcgctataccgtggtgggcaacccctactggatggcgcccgagatg
atccacggccgcagctatgatgagaaggtcgacgtgttttcctttgggatcgtcctgtgt
gagatcatcgggcgggtgaatgcagaccccgactacctgccccgcaccatggactttggc
ctcaacgtgcgcggcttcctggaccgctactgcccccccaactgccccccgagcttcttc
cctattaccgtgcgctgctgcgatctggaccctgagaagaggccctccttcctgaagctg
gaacagtggctggagaccctccgcatgcacctggccggccacctgcccctgggcccacag
ttggaacagctggacaggggcttctgggagacctaccggcgtggtgagagcggactgccc
gcccaccctgaggtccccgactga
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