Sciurus carolinensis (gray squirrel): 124970757
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Entry
124970757 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1B-like
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124970757
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124970757
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
124970757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
ZapB
SpoIIE
Motif
Other DBs
NCBI-GeneID:
124970757
NCBI-ProteinID:
XP_047390269
LinkDB
All DBs
Position
18:complement(19332058..19343936)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSGPGNKRAAGDGGSGPPEKKMSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDEIVEALLRCHESQGSXSA
GTEAPGTQEGPTRDVIPLTEPGTSELREPLPMQLRPPLSEPALAFVVALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPPGEAARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQTEL
QGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSTHSIPNLGHPEDSGL
SAPTPGKEEGGPVPVSTPDSRKEMTSVPGATTTTSSVKKEELVPSEEDSQALTPGAQGPS
SRGREPEARPXRELREREGPGLGPPPIASGLSRVDREKAKVEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESXK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcccggcaataaacgcgcagccggcgacgggggctcagggcccccagagaag
aagatgagccgcgaggagaagaccacaactactcttatcgaacccattcgccttgggggc
atctcttccacggaggagatggacttgaaggtactgcaattcaagaacaagaaactggca
gagcgtttggaacagcgacaagcgtgtgaagatgagcttcgagaacgaattgaaaagttg
gagaaacgtcaggccacagatgatgccacactcctcattgtcaatcgctactgggcccag
ctggatgaaattgtagaagctcttctccgatgccatgagagccaggggagcncatctgca
gggacagaggcacctgggactcaggaggggccgacacgtgatgtgatccctctcacagag
ccagggacatcagagctgagggagcccctgccaatgcagctgaggccccctctcagtgag
ccagccttggcttttgtggtggcgctgggtgccagcagcagtgaggaagtggagctacaa
ctgcagggccggatggagttctctaaggcagctgtgtcccgggtggtagaggcctcagac
cgcctacagcgccgggtggaggaactgtgtcagcgagtatacagccgaggggacagtgag
ccccctggtgaggcagctcgggcacgtacccgggagctgggccgtgagaaccgacgacta
caggacttggctactcagctgcaggagaagcaccaccgcatttcattggagtactctgag
ctccaggataaagtgacatcagcagagactaaggtgctagagatggagacaacagtggaa
gacctacagtgggacattgagaagctgcgtaagcgggagcaaaagctcaataagcacctg
gcagaggccttggagcagctcaactctggctactatgtgtctgggagctcctcaggcttc
caagggggccagatcacactcagcatgcagaagtttgagatgttgaatgcagagttggag
gaaaaccaggaattggccaatagccgcatggcagagttggaaaagctgcagacggaactt
cagggtgctgtgcggaccaatgaacgcctcaaggtggccctgcggagccttcctgaggag
gtggtaagggagacgggggagtaccgcatgctgcaggcccagttctcactactttacaat
gagtctctgcaagtgaagacccagctggacgaggcccggggactgctgctggccaccaag
aactcccacttgcgacacattgagcacatggagagtgacgagctggggctccagaagaag
ctgcgcacggaagttattcagctggaagacaccctggcccaggtacgcaaggagtacgag
atgttgcgcatcgagtttgaacagaacctggcggccaatgagcaggcgggacccatcaac
cgtgagatgcgtcacctgattagcagtctccaaaatcacaaccaccaacttaaaggggat
gcccagcggtataagcggaagcttcgggaagtacaggctgagattggcaagctccgggcc
caggccagtggctcaactcactccatcccaaacctgggccacccagaggactctggcctc
agtgctccaaccccagggaaagaagagggtgggccagtccctgttagtactcctgatagc
agaaaggagatgacttcagtccctggtgccaccactactacctcttcagtgaagaaggag
gagctggtcccctccgaagaggattcacaggccctaacccctggggcccagggcccctcc
tctcggggccgagaacctgaggccaggcccnagcgggaacttcgggaacgggaagggcct
ggcctaggacctccacctatagcctcaggtctctcaagggtagatcgggagaaggccaaa
gtggaagaagccaagaggaaggagtcagagctgctgaagggtctccgagcagagctcaag
aaggcccaggaaagccagaaggagatgaagctgctgctagacatgtacaagtcagcaccc
aaggagcagcgggataaggtgcagcttatggcagctgaacgcaaggccaaggctgaggtt
gatgagctacggagccgcatccgagaactggaagagagggatcgaagggagagcnaaaag
attgcagatgaggatgccctaaggcgcattcggcaggccgaagaacagattgaacacctg
cagcgcaagttgggtgccaccaaacaggaggaggaggctctgctgtcagagatggatgtg
acaggtcaggcttttgaggatatgcaggagcagaatgggcggctactccaacagttgcgg
gaaaaggatgatgccaactttaagctgatgtcagagcgaatcaaggccaaccagattcac
aaactgctacgggaggagaaggatgagctgggcgagcaggttcttggtctcaagtcccag
gttgatgcccaactgctgactgtgcagaaactggaagaaaaagaacgggccttacagggc
agcctagggggcgtggagaaggagctgacactgcgcagccaggccctagagcttaacaag
aggaaggctgtggaagctgcacaattggctgaggacctgaaggtacagctggagcatgtg
cagactcggctacgagagatccagccctgcctggcagagagcagggctgctcgtgagaaa
gagagcttcaacctcaagagggctcaggaggacatctcacggctgcggcgcaagctagaa
aaacagaggaaggtggaggtgtatgcagatgccgatgaaattcttcaggaggagatcaag
gagtacaaggcgcggttgacctgtccctgctgtaacacccgcaagaaggatgcagtcctt
accaagtgcttccacgttttctgcttcgaatgtgtgcggggtcgctatgaggcccgccag
aggaagtgccccaagtgcaacgcagcttttggtgcccacgacttccaccgtgtctacatc
agctga
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integrated database retrieval system
