Sciurus carolinensis (gray squirrel): 124970812
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Entry
124970812 CDS
T08117
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03030
DNA replication
ncar03410
Base excision repair
ncar03420
Nucleotide excision repair
ncar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124970812
03410 Base excision repair
124970812
03420 Nucleotide excision repair
124970812
03430 Mismatch repair
124970812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncar03032
]
124970812
03036 Chromosome and associated proteins [BR:
ncar03036
]
124970812
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124970812
DNA replication proteins [BR:
ncar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124970812
DNA Replication Termination Factors
ELG1-RFC complex
124970812
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124970812
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124970812
Check point factors
HRAD17(Rad24)-RFC complex
124970812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Viral_helicase1
Rad17
AAA_24
Mg_chelatase
AAA_11
RuvB_N
AAA_assoc_2
nSTAND3
AAA_18
AAA_19
MipZ
AAA_5
AAA_28
AAA_25
AAA_23
AAA_30
T2SSE
NTPase_1
ABC_tran
RNA_helicase
SLFN-g3_helicase
MeaB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124970812
NCBI-ProteinID:
XP_047390379
EnsemblRapid:
ENSSCRG00010021240
LinkDB
All DBs
Position
18:5037474..5052303
Genome browser
AA seq
352 aa
AA seq
DB search
MEVQPGGGGAGERAAEDPAPGPSKASGGAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEV
FAREGNLPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQILARLLSVMEKEEVRYTDDGLEAIIFTAQGDMRQALNNLQSTFSG
FGFINSENVFKVCDEPHPLLVKEMLQHCVDGSIDEAYKILAHLWHLGYSPEDVIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccagcctggcggaggtggcgcgggggagcgcgcggccgaggaccctgcgcca
ggccccagcaaggcctccggcggcgccggccactacgagctgccgtgggttgaaaaatac
aggccagtaaagctgaatgaaattgttgggaatgaagacactgtgagcaggctagaggtc
tttgcgcgagaagggaacctgcccaatatcatcatcgcgggtccccctggaactggcaaa
actaccagcatcctgtgtctggcccgagccctgctgggcccggcgctgaaggatgctgtc
ctggaactcaacgcctccaacgacaggggcattgacgtcgtgagaaataaaatcaaaatg
tttgcccaacagaaggtcaccctccccaaaggccggcacaagatcatcatcctggatgag
gcagacagcatgactgacggagcccagcaggccctgaggaggaccatggagatctactcc
aagaccacgcgcttcgctctggcctgcaacgcttccgacaagatcatagagcccattcag
tcccggtgcgccgtgctccgctacaccaagctcacggacgcccagatcctggcgaggctc
ctgagtgtcatggagaaggaggaggtgcggtacacagacgacggcctggaagccatcatc
ttcaccgcccagggggacatgaggcaggctctgaacaacttgcagtccaccttctcgggg
ttcggctttatcaacagtgagaacgtgttcaaggtctgcgacgagccccacccgctgctg
gtgaaggagatgctccagcactgcgtggatggcagcatcgacgaggcctacaagatcctc
gctcacctgtggcatctgggctactctccggaggatgtcatcggcaacattttccgagtg
tgtaagactttccagatggccgaatacctgaagctggagttcatcaaggagattggatac
actcacatgaaggtcgcagaaggcgtgaactcccttctgcagatggcggggctgctggcc
aggctgtgtcagaagacgatggccccggtggccagttag
DBGET
integrated database retrieval system