KEGG   Sciurus carolinensis (gray squirrel): 124971234
Entry
124971234         CDS       T08117                                 
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
  KO
K08530  peroxisome proliferator-activated receptor gamma
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03320  PPAR signaling pathway
ncar04148  Efferocytosis
ncar04152  AMPK signaling pathway
ncar04211  Longevity regulating pathway
ncar04380  Osteoclast differentiation
ncar04714  Thermogenesis
ncar04932  Non-alcoholic fatty liver disease
ncar05016  Huntington disease
ncar05200  Pathways in cancer
ncar05202  Transcriptional misregulation in cancer
ncar05216  Thyroid cancer
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04152 AMPK signaling pathway
    124971234
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    124971234
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    124971234
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124971234
  09149 Aging
   04211 Longevity regulating pathway
    124971234
  09159 Environmental adaptation
   04714 Thermogenesis
    124971234
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124971234
   05202 Transcriptional misregulation in cancer
    124971234
  09162 Cancer: specific types
   05216 Thyroid cancer
    124971234
  09164 Neurodegenerative disease
   05016 Huntington disease
    124971234
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124971234
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    124971234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124971234
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ncar03310]
    124971234
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    124971234
Nuclear receptors [BR:ncar03310]
 1. Thyroid hormone like
  1C. Peroxisome proliferator-activated receptor (PPAR)
   124971234
SSDB
Motif
Pfam: PPARgamma_N zf-C4 Hormone_recep Tmemb_55A
Other DBs
NCBI-GeneID: 124971234
NCBI-ProteinID: XP_047390974
LinkDB
Position
19:complement(13041692..13181074)
AA seq 475 aa
MVDTEMPFWPTNFGISSMDLSVMDDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRADPMV
ADYKYDLKLQEYQSAIKVEPVSPPYYSEKTQLYNRPHEEPSNSLMAIECRVCGDKASGFH
YGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRF
GRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTT
DKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKS
IPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGD
FMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLK
LNHPEASQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggttgacacagagatgccgttctggcccaccaactttggaatcagctccatggacctc
tccgtgatggacgaccactcccactccttcgacatcaagcccttcaccacagtcgatttc
tccagcatttccactccacactatgaagacattccgttcaccagagctgatccaatggtg
gctgattataaatatgacctaaagctccaagagtaccaaagtgcaatcaaagtggaacct
gtgtccccaccttattattctgaaaagactcagctctacaatcggcctcatgaggagccc
tctaactccctcatggccatcgagtgccgcgtgtgtggagataaagcttctgggttccac
tatggtgttcacgcctgtgaaggttgcaagggtttcttccggaggaccatccgattgaag
cttatttatgatagatgtgatcttaactgtcggatccacaaaaaaagtagaaataaatgt
cagtactgtcgatttcagaaatgcctggctgtggggatgtctcataatgccatcaggttt
gggcggatgccacaggccgagaaggagaagctgttggccgagatctccagtgatatcgac
cagctgaacccagagtctgctgatctccgggccctggcaaagcatttgtatgactcatac
ataaagtccttcccactgaccaaagccaaggcgagggcgatcttgacaggaaagacaaca
gacaaatcaccatttgtcatctatgacatgaattccttaatgatgggagaagataaaatc
aagttcaaacacatcacgcccctgcaggagcagagcaaagaggtagccatccgcatcttt
cagggatgccagtttcgctcagtggaagctgtgcaagagatcacagagtatgccaaaagc
attccgggttttgttaaccttgacttgaatgaccaagtaactctcctcaaatacggtgtc
catgagatcatctataccatgctggcctccctgatgaataaagatggcgtcctcatatca
gagggccaaggattcatgacaagggagttcctcaagagcctgcggaagccctttggtgac
tttatggaacccaagtttgagtttgctgtgaaattcaatgcactggaattagatgacagc
gacttggcaatatttatagccgtcattattctcagtggagaccgcccaggcttgctgaac
gtgaagcccatcgaggacatccaggacaacctgctgcaagccctggagctccagctcaag
ctgaaccaccccgaggcctcgcagctgttcgccaagctgctccagaaaatgacagacctc
agacagatagtcaccgagcacgtgcagctattgcaagtgatcaagaagacggaaacggac
atgagtcttcacccactcctccaggaaatctacaaggacttgtattag

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