Sciurus carolinensis (gray squirrel): 124971354
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Entry
124971354 CDS
T08117
Name
(RefSeq) lysosome-associated membrane glycoprotein 2-like isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03272
Virion - Hepatitis viruses
ncar03273
Virion - Lassa virus and SFTS virus
ncar04140
Autophagy - animal
ncar04142
Lysosome
ncar04145
Phagosome
ncar05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124971354
03272 Virion - Hepatitis viruses
124971354
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124971354
04142 Lysosome
124971354
04140 Autophagy - animal
124971354
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
124971354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124971354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124971354
04090 CD molecules [BR:
ncar04090
]
124971354
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
124971354
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
124971354
Other autophagy associated proteins
RNautophagy/DNautophagy
124971354
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
124971354
CD molecules [BR:
ncar04090
]
Proteins
124971354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Toast-rack_PspC-Cterm
CTV_P6
Motif
Other DBs
NCBI-GeneID:
124971354
NCBI-ProteinID:
XP_047391078
LinkDB
All DBs
Position
X:complement(100376203..100409855)
Genome browser
AA seq
458 aa
AA seq
DB search
MTRAGAAFLGSHSAVVGVISALSPGPGAVFAGVAALVVTAASSSVGSWCTSACPRFQAPG
SFCSASFLGADWSYALELNLTDSANATCLYAKWQMNFTITYETTNKTYRTVNISDLSTVR
HEGSTCGDDQNGPRIVIHFGSGFSWIVNFTKNAPDYLIDTISFSYNTNDHTIFPDAEHKG
NITIDKRVALKIPLNDIFRCKSLLTIEKNNVTQHFWNVLVQAFVQSGTVSTKEYLCDEDK
HSTTVAPIIHTTVPSPTTTPTPTEKPKVGTYSVSNGSNTCLLATMGLQLNVTQDKVSSII
NINPNTTGVTGSCHPQTAQLRLNSSIIKYLDFVFAVKNENRFYLKEVNVSMNLVNGSVFS
IANNNLSYWDAPLGSSYMCNKEQTVSVSGTFQINTFDLRVQPFNVMEGKYSTAQDCSADD
DNFLVPIAVGAALAGVLILVLLAYFIGLKRHHAGYEQF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactcgggctggagcggcgtttcttggctctcacagcgctgtggtcggtgtcatcagt
gcgctgtccccaggtccaggagccgtttttgctggtgttgctgcccttgttgtcaccgct
gcctccagctctgtgggatcatggtgtacttccgcctgtccccggtttcaggctccgggc
tccttctgctctgcctcgttcctgggagctgactggtcttatgcattggaacttaatttg
acagattcagcaaatgctacttgcctttatgcaaagtggcagatgaatttcacaataacc
tatgaaactacaaacaaaacttatagaactgtaaacatttcagatcttagcactgtgaga
catgagggaagcacttgtggagatgaccagaatggtccaagaatagtgatacactttgga
tctggattttcctggattgtaaactttaccaagaatgctcctgattatttgattgacacc
atctcattttcctacaacactaatgatcacacgatttttcctgatgctgaacataaagga
aatattaccattgacaaacgtgtggcattaaaaattccattgaatgacatctttagatgc
aaaagtttgttaactatagaaaagaataatgtcactcagcacttttggaatgttcttgta
caagcatttgtccagagtggcacggtgagcacaaaagaatatctgtgtgatgaagacaaa
cattccaccacagtggcacccatcattcacaccactgtgccatctcctactacaacaccc
actccaacagaaaaacccaaagtgggaacctattcggttagtaatggcagcaacacttgt
ctgctggctaccatggggctgcagctgaacgtcactcaggataaggtttcttcaattatt
aacattaaccccaatacaacaggcgtcactggcagctgccatcctcagactgctcaactt
agactgaacagcagcatcattaagtatcttgactttgtctttgctgtcaaaaacgaaaac
cgattctatctgaaggaagtgaatgtcagcatgaatttggttaatggctctgttttcagc
attgcaaataacaaccttagctactgggatgctcctctgggaagttcttatatgtgcaac
aaagagcagactgtttcagtgtctggaacatttcagataaatacctttgatttaagagtt
cagcctttcaatgtgatggaaggaaagtattctacagctcaagactgcagtgcagatgac
gacaacttccttgtgcccatagcggtgggagcagccttggcaggagtacttattctagtg
ttgctggcttattttattggtctcaagcgtcatcatgctggatatgagcaattttag
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