Sciurus carolinensis (gray squirrel): 124971390
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Entry
124971390 CDS
T08117
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124971390
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124971390
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124971390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
124971390
NCBI-ProteinID:
XP_047391114
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Position
X:45091308..45103987
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AA seq
518 aa
AA seq
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MLRVVSWNINGIRSPLQGVVCQEPSNCTSMAMRRILDELDADIVCFQETKVTRDVLTEPL
AIVEGYNSYFSFSRIRSGYSGVATFCKDSATPVAAEEGLSGLFATQNGDVGCYGNMDEFT
QEELRALDSEGRALLTQHKIRTWEGKERTLTFINVYCPHADPGKPERLTFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRPIDHCDAVNLECFEEDAGRKWMDGLLGNLGCRAGSHV
GPFVDSYRYFQPKQERAFTCWSVVSGARHLNYGSRLDYVLGDRTLVIDTFQDSFLLPQVM
GSDHCPVGATLNVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVPLEQEPVLEQSALQLS
NKTQVQKQQNKVRVRSTRPRPSQSNSRRGQTNLMSYFQPSSSHSKTSPDLELHNLPLVKN
LITPKTLEEKVMAREVEGQAKHSEGKDEKELRTSFWKSVLGGPSPMPLCSGHREPCVMRT
VKKPGPNLGRHFYMCARPRGPPSDPSSRCNFFLWSRPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgttgtgagctggaacataaatggaatccgaagtcccctgcaaggggtggtt
tgccaggaacccagcaactgtacctccatggccatgagacgcattttggatgaactggat
gccgatattgtgtgtttccaggagaccaaagtgactagggatgtgctgacagagcccctg
gctatcgttgagggctataactcctatttcagcttcagccgaatccgtagtggctattct
ggtgtagctaccttctgtaaggacagcgctaccccagtggctgctgaagaaggcctgagt
ggcttgtttgccacccagaatggggacgtgggttgttatggaaacatggatgagttcacc
caagaggagctccgagctctggatagtgagggccgtgccctccttacacagcataagatc
cgcacttgggaaggaaaagagaggaccttgaccttcatcaatgtgtactgcccccacgca
gaccctgggaagcctgagaggctgacctttaagatgcgcttctatcgcttgctgcagatc
cgagcagaagccctcttggcagctggcagccatgtgatcattttgggtgacctgaataca
gcccaccgccccattgaccactgtgatgcagtcaatctggaatgctttgaagaagacgca
gggcgcaaatggatggacggcttgcttggtaacctggggtgccgggctggatcccatgta
gggccctttgttgatagctaccgctatttccagccaaagcaggagagggccttcacctgc
tggtcagtggttagtggcgcccgccatctcaactatggttcccggcttgactatgtgctg
ggggacaggaccctggtaatagataccttccaggactccttcctgctacctcaggtgatg
ggctctgaccactgtcctgtgggtgccaccttgaatgtgtcctctgtgcctgcaaaacag
tgcccacctctgtgcacccgcttccttcctgagtttgcaggcacccagctcaagattctc
cgcttcctagttcctcttgaacaagaacctgtgttggaacagtcagcactgcagctcagc
aataaaacacaggtacagaaacagcaaaacaaagtccgtgtgcgctcaaccaggcctcgg
ccaagtcagtctaactccagaagagggcagacaaacctgatgagctacttccagccctcc
tccagccattccaaaacttctcctgacttggagctgcataacttgcctctggtgaaaaac
ctcataaccccaaagactctagaagagaaggtgatggccagagaggtagaagggcaggcc
aagcattcagagggtaaagatgagaaggagttacgaacctcattctggaagtctgtactg
gggggaccttcacccatgcccctctgcagtggccacagggagccatgtgtgatgcgaact
gtaaagaagccaggacccaacctgggtcgccacttctacatgtgtgccaggccccggggt
cctcccagtgacccctcctcccgctgcaacttctttctctggagcaggcccagctga
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