Sciurus carolinensis (gray squirrel): 124971396
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Entry
124971396 CDS
T08117
Name
(RefSeq) rho guanine nucleotide exchange factor 2 isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04530
Tight junction
ncar05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124971396
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
124971396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124971396
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124971396
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
C1_2
Prok-RING_1
Zn_ribbon_19
TrbK
Motif
Other DBs
NCBI-GeneID:
124971396
NCBI-ProteinID:
XP_047391168
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All DBs
Position
1:94104356..94158288
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AA seq
1220 aa
AA seq
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MNRAVPEVFLAGGDPVPQGRTRRCLSAVESREQLEEEEKENEEEKEGQKKEGNDFHAVPL
RRSGAFRAHSHTYDPFKRHSWGPGREFQDPLSSGGNVCFRRRLQASECPGPQETPLLQSQ
EELDTILGSQQQSGQPSHLDHSDFLFLLDSVLGQGSCHPSADSLDHSVTGMLSKSASMSA
INCLLERSDPDGRSSQSSATDLSKRWNQLEGNSGTWAGSSLRRTFSFLFLMTGKSKVPER
RSDLRPNPGSPCLETREKEKMKEAKDARYTNGHLFTTISVSGMTMCYACNKSITAKEALV
CPTCNVTIHNRCKDTLANCTKVKQKQQKAALLKNNTALQSVSLRSKTTTRERPSSAIYPS
DSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNDETPLGLRRILSQSTDSLNMRNRTLSV
ESLIDEGAEVIYNELMSDFEMDEKDFAADSWSLAVDGSFLQQHKKEVMKQQDVIYELIQT
ELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDELSDIHTRFLSQLLERRRQALC
PGSSRNFVIHRLGDLLISQFSGPSAEQMRKTYSEFCSRHTKALKLYKELYARDKRFQQFI
RKVTRSAVLKRHGVQECILLVTQRITKYPVLINRILQHSHGAEEERQDLTAALGLVKELL
SNVDQDVHELEKGARLQEIYNRMDPRAQAPVPGKGPFGREELLRRKLIHDGCLLWKTATG
RFKDVLMLLMTDVLLFLQEKDQKYIFPALDKPSVVSLQNLIVRDIANQEKGMFLISAAPP
EMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETEDEAYLRRIKMELQQKDRALVE
LLQEKVGLFAEMTHFQAEEDGGSGMPLPTLPRGLFRSESLESPRGERLLQDAIREVEGLK
DLLVGPGVELLVTPRESALPLEPDSGGNTSPGVTANGEARTFNGSIELCRADSDCSQKDR
NGNQLRSPQEEALQRLVNLYGLLHGLQAAVAQQDTLMEARLPEGPERREKLSRANSRDGE
AGRAGTAPLAPEKQATELALLQRQHALLQEELRRCRRLGEERATEAGSLEARLRESEQAR
ALLEREAEEARRQLAALGQTEPLPAEAPWARRPLDPRRRSLPAGDALYLSFTPPQPSRGH
DRLDLPVTVRSVHRPFEDRERQELGSPEERLQDSSDPDTGSEEEGSSRLSPPHSPRDFTR
MQDIPEETESRDGEPVASES
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagctgtcccagaggtgttcctcgcaggtggagacccagtgccccaaggccgc
actcgccgttgcctgtccgcagtggaatccagagagcagctagaggaagaggagaaagaa
aatgaggaagaaaaggagggacaaaaaaaagaggggaatgatttccatgctgtacccctc
cgaagatcaggggctttccgtgcccacagccacacctatgaccccttcaaaagacatagt
tgggggcctggcagggagttccaggacccactgagcagtggtggcaatgtgtgtttcagg
agaagactgcaggcatcggaatgcccaggcccccaggaaacccccttactacagagtcaa
gaagaactggataccattctgggatcacagcagcagagtggccaaccctcccacctggac
cattcagactttctatttcttcttgattcagtgttgggtcagggttcctgtcatccatct
gctgactctttggaccactcagtcactggcatgctttccaagtctgcatccatgagtgcc
atcaattgcctcttggagcgctcagatccagacggacgttcatcccagtcctctgccact
gacctcagcaaacgctggaaccagctggaagggaactcaggtacctgggcaggctcctcc
ctgcgacggaccttcagcttcctcttcctcatgactggcaagtcaaaggtcccagagagg
aggagtgacctgagaccaaatccaggttccccctgcctagagacccgggaaaaggagaag
atgaaggaagccaaggatgcccgctatacgaatgggcacctcttcaccaccatctcagtt
tcgggcatgaccatgtgctatgcctgtaacaagagtatcacagccaaggaagccctcgtc
tgcccaacctgcaatgtgactatccacaaccgctgtaaagacaccctcgccaactgtacc
aaggtcaagcagaagcaacagaaagccgctctgcttaagaacaacactgccttgcagtct
gtttctcttcgcagtaagacaaccacccgggagcggccttcctctgccatctacccctca
gacagcttccggcagtccctccttggctcccgccgtggccgctcgtccttgtctttagcc
aagagtgtctccactacgaacattgctggacatttcaatgatgagactcccctggggctg
cgtcggatcctctcacagtccacagactccctcaacatgcggaaccgaaccctgtcggtg
gaatcccttattgatgaaggtgcagaggtgatctacaatgagctgatgagtgactttgaa
atggatgaaaaggactttgcagccgattcctggagccttgctgtggatggcagcttcctg
cagcagcacaaaaaggaggtgatgaagcagcaggacgtcatctatgagctaatccagaca
gagctgcaccatgtgaggacgctgaagatcatgacccgcctcttccgcaccgggatgctg
gaagagctacagttggagccaggagtagtccagggcctgttcccctgtgtggatgagctc
agtgacatccatacacgcttcctcagccagctgttagaacgccgacgtcaggctctatgt
cctggcagctcccggaactttgtcatccatcgcttgggtgacctgctcattagccagttc
tcaggtcccagcgcagagcagatgcggaaaacctactcagagttctgcagccgccacacc
aaggccttaaaactctataaggagttgtatgctcgagacaaacgcttccagcagttcatc
cggaaagtgacccgttcagctgtgctgaagcggcatggggtccaggagtgcatcctcctg
gtgactcagcgaatcaccaagtacccagtgctcatcaaccggatcctgcagcattcccat
ggggctgaggaggagcgccaggacctaacagccgcactggggctagtgaaggagttactg
tccaatgtggaccaggatgtgcacgagctggagaaaggggcccgcctgcaagagatctac
aaccgcatggaccctcgggcccaggccccagtgcctggcaaggggccctttggtcgagag
gaacttctgcggcgcaagctcatccatgatggctgcctgctgtggaagacagcaacgggt
cgcttcaaagatgtgctgatgctgctgatgacagatgtgctgttatttctccaggagaag
gaccagaagtacatctttcctgccctggacaaaccctcagtggtatcactgcagaatctg
attgttcgggacatcgccaaccaggaaaaaggaatgttcctgatcagcgcagccccgcct
gagatgtatgaggtgcatacagcatcccgggatgaccggagcacctggatccgtgtcatt
cagcagagtgtgcgcgtatgcccatccagggaggacttccccctgattgaaactgaggat
gaggcttacctacggcggatcaagatggagctgcagcagaaggaccgcgcgctggtggag
ctgctgcaggagaaggtcgggctgtttgctgagatgacccacttccaggcagaagaagat
ggcggcagcggaatgcccctgcccaccctgcccaggggccttttccgctcagagtccctt
gaatcccctcgtggcgagagactgttacaggatgctatccgtgaggtggagggcttgaaa
gacctgctggtgggacctggagtagagctgctcgtgacaccccgagaatcagccctgccc
ttggaaccagacagcggtggtaacacaagtcctggggtcactgccaatggtgaggccaga
actttcaatggctccattgaactctgcagagctgactcagactgtagccagaaggatcga
aatggaaatcagctgagatccccacaagaggaggcgttacagcggttggtcaatctctat
ggacttctacatggcctacaggcggctgtggcccaacaggacactttgatggaagctcgt
ctccccgagggccctgagcggcgggagaagctgtcccgagccaactctcgggatggggag
gctggcagggccgggacagcccctctggctcctgaaaagcaggccacagagctggcactg
ctgcagcgacaacacgcactgctgcaagaggagctgcggcgctgccgaaggctaggcgag
gaacgggccactgaggctggcagcctggaagcccggctccgggagagtgagcaggcccgg
gcgctgctggagcgggaggcggaagaagctcgcaggcagctggccgccttgggccagact
gagccactcccagctgaggccccctgggcccgcaggcctctggatcctcggaggcgcagc
ctcccagcaggcgatgccctgtacttgagtttcacgccccctcagcccagccgaggacat
gaccgcctggatctgcctgtgactgttcgttctgtccaccgaccctttgaggaccgtgag
aggcaggagctgggtagtccagaagagcgactgcaagacagcagtgaccctgacaccggc
agtgaggaggaaggtagcagccgtctgtctccaccccacagtccacgagacttcactcga
atgcaggacatcccggaggagacggagagccgcgatggggagcctgtggcttcagagagc
taa
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