Sciurus carolinensis (gray squirrel): 124971398
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Entry
124971398 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124971398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124971398
03036 Chromosome and associated proteins [BR:
ncar03036
]
124971398
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124971398
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124971398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124971398
NCBI-ProteinID:
XP_047391140
LinkDB
All DBs
Position
X:complement(59082012..59317164)
Genome browser
AA seq
2487 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSIDKTSGSANNSDMMENN
KDEGTSSSEKSKASGSSRSKRKPSIVTKYVESDDEKPLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKID
SEKSTKVCEHAPRFSPKKNTSNCNGEEKKLDDSCSGSVTYTYSALIVPKEMIKKTKKLIE
TTANMNSSYVKFLKQATDNSDISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALD
AVNKEKNTKEHKGVDAKSETKVRKGEKTFALERKDISKSEGKPSRKQVDNEHMDQSVPAE
EQRANKSTSGEHKKSDRKEEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLETAMEVQSS
TDYHGDGNSGTEQELESSSVKLNTPSKDNRGGIKSKTTAKVTKELYVKLTPVSLSNSPVK
GADCQEVLQDKDGHKSSGLNPKSEKCGPGRENTDNEHLIENEAPLILEESDLRRSPRVKT
TPLRRQTETNPATSNSDEESNEAVKEKQKLPVPMRKKDKRNSSDSAIDNPKPNKLPKSKQ
SEIVDQNSDSDEMLAILKEVSRMSHSSSSDTDINETQTNHKTLYDLKTQKGKEDKGKRKR
KSSTSGSDFDIKKGKSAKSSIISKKKRQNQSESSNYDSELEKEIKSMSKIGAARTTKKRL
SNKKDYDSSEDEKHSKKGMDNQGQKSLKTAQEGSSDDAERKQESFSSAEGTTEKDKTIME
LRDRLSKKQQPSVSSDVADKPSSGKEESLNSPEDKKVVETKEKSKYLKTKTCKKTQGGLS
DVAEKFPKKEQSDESSEEDKKQNKKGIEEKETKTVDLKKKAIKIEQQYESSSDSTEKLPE
GEEICHFSKGLKQSRSDITDGEKKSKKMKDKISKKKEELSDNVEKVPGKGDSCDSSEDKK
SKNRASGREKKRRNLPEKSSRKRQDCSSSDTEKYSMKQDGCDSSDKKPKRIELRERRNLN
SKRNAKEIQSGSSSSDAEESSEDNKKQKKQRASAKKKAGNVKEKKRNSLRTSNKRKQADI
TSSSSDVGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDD
DDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEGGKKRTGKQNEENPGDEEAKNQVN
SESDSDSEESKKPRYRHRLLRHKLTVSDGESGEDKKTNPKENKEVKGRNRRKVSSEDSED
SDFQESGVSEEVSESEDEQRPRTRXVCKKAELEENQRSYKQKKKRRRIKIQEDSSSENKS
HSEEEEKEEEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKR
IAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVD
GVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVC
PLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMY
RNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIIL
TGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHI
LYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSNEGGRG
KAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDD
YTKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNMDETGNNPSVSLKLED
SKATSSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLI
SLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDE
TNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRF
LAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKK
RDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGL
TMRFNIPTGTNLPPVTFSAQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAV
RIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCV
QRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAG
GMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagtgaaagcaagttgaatactttggtgcagaagcttcatgac
ttcctggcacactcatcagaagaatctgaagaaacaagttctcctccacgacttgtgatg
aaccaaagtatagataaaaccagtggttctgcaaataactctgatatgatggaaaataac
aaggatgagggaaccagctcttcagaaaaatccaaagcttcaggatcatcacgatcaaag
aggaaaccttcaattgtaacaaagtatgtagaatctgatgatgaaaaacctttggatgaa
actgtgaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagtttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatggaattgtgagctgcacagcttgtggacagcaggtcaatcatttt
caaaaagattccatttatagacacccttcactgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgtgactcagacggaatggatgaacaatgtaga
tggtgtgcagaaggcgggaacttgatttgttgtgacttttgccataatgccttctgtaag
aaatgcattctccgcaaccttggtcgaaaggagctgtctacaataatggatgaaaataac
caatggtattgctacatttgtcacccggagcctttattggacttggtcactgcatgtaac
agtgtatttgagaacttagaacaattgttgcaacaaaataagaagaagataaaaattgac
agtgaaaagagtactaaagtatgtgaacatgcacccagattttctccaaagaagaatact
tcaaattgcaatggagaagaaaagaaattagatgattcatgttctggctctgtaacctac
acttattctgcattaattgtgcccaaagagatgattaagaaaacaaaaaaactgattgag
accacagccaacatgaactccagttacgttaagtttttgaagcaagcaactgataattca
gatatcagttctgctacaaagttacgtcagcttaaggcttttaaatctgtgttggctgat
atcaagaaagcgcatcttgcattagaggaagatttgaattcagagattcaagctttggat
gctgtaaacaaagagaaaaataccaaagagcataaaggtgtagatgctaagtcagaaaca
aaagtacgaaaaggagaaaaaacctttgctttggaaaggaaggatatttcaaagtcagaa
ggtaaaccatcaagaaagcaggtagataatgagcacatggatcagagtgttccagcagag
gaacaaagagcaaataaaagtaccagtggtgagcataagaaatctgacagaaaagaggaa
cctcagtatgaacctgctaacacttctgaagacttagacatggatattgtgtctgttcct
tcctcagttccagaggacatttttgagaatcttgagacagctatggaagttcagagttca
actgattatcatggggatggcaatagtggaactgagcaagaattggagagttcatccgta
aaattaaatactccttcaaaagacaacagaggaggtattaagtcaaaaactacagctaaa
gtaacaaaggaattatatgtcaaactcacccctgtttccctttctaattccccagttaaa
ggtgctgattgtcaggaagttctacaagataaagatggccataaaagttctggtttgaac
cccaagtcagagaaatgtggacctggtcgggaaaacactgataatgagcatttaattgaa
aatgaagctccattaattttagaagaatctgatcttcgaagatccccacgcgtaaagact
acacccttgaggcgacagacagaaactaaccctgcaacatccaattcagatgaagaaagt
aacgaagcagttaaggagaaacaaaaactaccagttccaatgaggaaaaaggacaagcga
aattcttctgacagtgctatagataatcctaagcctaataaattgcctaagtctaagcaa
tcagagattgtggatcaaaattcagattctgatgaaatgctagcaatcctcaaagaggta
agcaggatgagtcacagttcttcttcagatactgatattaatgaaactcagacaaatcat
aagactctgtatgatttaaagactcaaaaagggaaagaagataaaggaaaaagaaaacga
aaaagttctacttctggctcagattttgatattaaaaaaggcaaatcagctaaaagctct
ataatttccaaaaagaaacgccaaaaccagtctgagtcttctaattatgactcagaatta
gaaaaggagataaaaagcatgagtaaaattggggctgccaggacaaccaaaaaaagactt
tcgaataaaaaagattatgattcttctgaagatgaaaaacacagcaaaaaagggatggat
aatcaagggcagaaaagtttgaagactgcacaagaaggatcatccgatgatgctgaaagg
aaacaagagagtttttcttcagcagaaggcacaactgagaaagacaagaccataatggaa
ttaagagatcgactttctaagaagcagcaaccaagtgtttcttccgatgttgctgataag
ccttcttcagggaaagaggagagtttaaattccccagaagacaaaaaagttgttgaaact
aaagaaaagagcaagtatctgaaaaccaaaacatgtaaaaaaacacagggtggcttatct
gatgttgctgagaaattcccaaagaaagagcagagtgatgaatcctctgaagaagataaa
aagcagaacaaaaagggaattgaagaaaaagaaacaaagactgtagacttgaagaaaaaa
gcaattaagatagaacagcaatatgaatcatcatctgatagtactgagaagttacctgag
ggagaagaaatttgtcatttttctaagggcctaaaacaaagtaggagtgacataactgat
ggagaaaagaaaagtaaaaaaatgaaagataaaatttctaaaaagaaggaagaattatct
gataatgttgaaaaggtaccagggaaaggagatagttgtgactcttcagaagataaaaag
agtaagaatagagcatcaggtagagagaagaaaagacgcaacttgcctgaaaagagttca
aggaagagacaagattgttcatcatctgatactgagaaatattccatgaaacaagatggt
tgtgactcttctgataagaaaccgaaaagaatagaattgagggaaagaagaaatttaaat
tcaaagagaaatgccaaggaaatacaaagtggctcatcatcttctgatgctgaggaaagt
tctgaagataataaaaagcagaagaaacaaagagcttcagctaaaaagaaggcaggcaat
gtcaaggaaaaaaagagaaactccctaagaacaagcaataaaaggaagcaagcagacatt
acttcctcatcttctgatgtaggagatgatgatcagaattctgtaggcgaggggagcagt
gatgaacagaaaattaagcctgtgactgaaaatttagtgctttcttcacacactggattt
tgccaatcttcaggagatgaagccttatctaaatcagtgcctgtcacagtggatgatgat
gacgacgacaatgatcctgagaatagaattgccaagaagatgcttttagaagaaattaaa
gccaatctttcctctgatgaggatgggtcttcagatgatgaaccagaaggagggaaaaag
agaactggaaaacaaaatgaagaaaacccaggagatgaggaagcaaaaaatcaagtcaat
tctgaatcagattccgattctgaagaatctaaaaagccaagatacagacataggcttttg
aggcacaaactgactgtgagtgatggagaatctggagaagacaaaaagacaaaccctaaa
gagaataaagaagtcaaaggcagaaatagaaggaaggtgagcagtgaagattcagaagat
tctgattttcaggagtcaggagttagtgaagaagttagtgaatctgaggatgaacagcga
cccagaacaaggtaagtctgcaaaaaggcagaattggaagaaaatcaacggagttataaa
cagaaaaagaaaagaagacgcattaagattcaagaagattcatccagtgaaaacaagagc
cattctgaagaagaagaaaaagaagaggaggaggaagaggaggaggaggaggaagatgaa
aatgatgattctaagtctcctggaaaaggcaggaagaaaatccggaagattcttaaagat
gataaactgagaacagaaacacaaaatgctctgaaagaagaggaagaaaggcgaaaacgt
attgctgagagggagcgtgagcgagagaaattgagagaggtgatagaaattgaagatgct
tcacctactaagtgtccaataacaaccaaattggttctagatgaagatgaagaaaccaaa
gaacctttagtgcaggttcatagaaatatggttatcaaattgaaaccccaccaagtagat
ggtgttcagtttatgtgggattgctgttgtgagtctgtgaaaaagacaaagaaatctcca
ggttcaggatgcattcttgcccattgcatgggacttggtaagactttacaggttgtaagt
tttcttcatacagttcttttgtgtgacaaattggatttcagcacagctttagtggtttgt
cctcttaatactgctttgaattggatgaatgaatttgagaagtggcaagaaggattaaaa
gatgatgagaagctcgaggtctctgaattagcaactgtgaaacgtcctcaggagagaagc
tatatgctgcagaggtggcaagaagatggtggtgttatgatcatagggtatgagatgtac
agaaatcttgctcaaggaaggaatgtgaagagtcgtaaacttaaagaaatatttaataaa
gctttggttgatccaggtcctgactttgttgtttgtgatgaaggccatattctaaaaaat
gaagcatctgctgtttcaaaagctatgaattctatacgatcaaggaggaggattatttta
accggaacaccacttcaaaataacctaattgagtatcattgcatggttaacttcatcaag
gaaaatttgcttggatccattaaggagttcaggaatagatttataaatccaatccaaaat
ggtcagtgtgcagattctaccatggtagatgtcagagtgatgaaaaaacgtgctcacatt
ctttatgagatgttagctggatgtgttcagaggaaagattatacagcattaacaaagttt
ttgcctccaaaacatgaatatgtattagctgtgagaatgactcctattcagtgcaaactt
tatcagtactacttagatcacttaacaggtgtaggtaatagtaatgaaggtggaagagga
aaggcaggtgcaaaacttttccaagattttcagatgttaagtagaatctggactcatcct
tggtgtttgcagctggactacattagcaaagaaaataagggatattttgatgaagatagc
atggatgaatttatagcttcagattctgacgaaacttccatgagtttaagctccgatgat
tatacaaagaagaagaaaacaaaggggaagaaggggaaaaaggatagcagctcaagtgga
agtggcagtgacaatgatgttgaagtgatcaaagtctggaattcaagatctcgaggaggt
ggtgaaggaaatatggacgaaacaggaaacaacccttcagtttctttaaagctggaagat
agtaaagctacttcttcttctaatccaagcagcccagctccagactggtacaaagatttt
gttactgatgctgatgctgaggttttagagcattctggaaaaatggtacttctctttgaa
attcttcgaatggcagaggaaattggggataaagttcttgtttttagccagtcactgata
tctctggacttgattgaagattttcttgaattggctagtagagagaaaacagaagataaa
gacaaacctcttatttataaaggtgaggggaaatggctccgaaacattgactattaccgt
ttagatggttctactactgcacagtcaagaaagaaatgggctgaagaatttaatgatgaa
actaatgtgagagggcggttgtttatcatttccactaaagcaggatctcttggaattaat
ctggtagctgctaatcgagtaattatatttgatgcttcttggaatccatcttatgatatc
cagagtatattcagagtttatcgctttggacaaactaagcctgtttatgtatataggttc
ttagctcagggaaccatggaagataagatatatgatcggcaagtaactaaacagtcatta
tcttttcgagttgttgatcaacaacaggttgagcgccattttactatgaatgagcttact
gaactttatacctttgagccagacttattagatgaccctaattcagaaaagaagaagaag
agggatactcccatgctgccaaaggatactatacttgcagaacttcttcaaatacataaa
gaacacattgtaggatatcatgaacatgattctcttttggaccacaaagaagaagaagag
ttgaccgaagaagagaggaaagcagcctgggctgaatatgaagcagaaaagaagggtctg
accatgcgtttcaacataccaactgggaccaatttaccccctgtcactttcagcgctcaa
actccttatattcctttcaatttgggagccctgtcagcaatgagtaatcaacagctggag
gacctcattaatcaaggaagagaaaaagttgtagaagcaacaaacagtgtgacagcagtg
aggattcagcctcttgaagatataatttcagctgtttggaaagaaaacatgaatctctca
gaggcccaagtacaggcattagcattaagtagacaagccagccaggagcttgatgtaaaa
cgaagagaagcaatctacaatgatgtattgacaaaacaacagatgttaatcagctgtgtt
cagcgaatacttatgaacagaaggctccagcagcagtacaatcagcagcaacagcaacaa
atgacttatcaacaagcaacactaggtcacctcatgatgccaaagcctccaaatttaatc
atgaatccttctaactaccagcagattgatatgagaggaatgtatcagtcagtggctggt
ggtatgcagccaccacccttacagcgagcaccacccccaatgagaagcaaaaatccagga
ccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
