Sciurus carolinensis (gray squirrel): 124971404
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Entry
124971404 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124971404
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124971404
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GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124971404
NCBI-ProteinID:
XP_047391145
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Position
X:21807100..21808893
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AA seq
597 aa
AA seq
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MSDHESGTTASPDLENGSPLGVSEETSGVEAGRDTYSEIEREASKSTGDGDDNSDGGVST
HVSPESERADPESSSDTNDFHTEEDFDNVVNSEESLSHHHLEEEGETEEEDEERQLQVCL
QYRGNNREDEDRALEEWVTSETSALPRPRWQVLPALRERQLGSSSRFIYDACGSRAFVQR
LSLQYGLDGHLGCVNTVHFNQRGTWLATGSDDLRVIVWDWIGKRPVLDFESGHKNNVFQA
KFLPNCGDSILATCSRDGQIRVAELSAPTCGKNTKCVAKHKGASHKLALEPDSPFKFLTS
GEDAVVYTIDLRQGQPASKVVVTKEKEKKVGLYTIHVNPSNIYQFAVGGRDQFVRIYDQR
KIDENDNNGVLKKFCPHHLLNCDTKTSITSLVYNHDGTELLVSYSDEDIYLFNSSDSDGA
QYVKRYKGHRNDATVKGVNFYGPRSEFVMTGSDCGHIFLWEKASCQIIQFMVGDKGGTVN
CLEAHPHLPVMATSGLDHDVKIWAPTAIASTELTGLKNVLRQNKQKRDIDSLYHPDMFDS
HMLWFLTSRLTQRNHYQHWGGPGLQGMSADLLESSSTSDTSEEEEEESQDXVQCLPS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcacgagagcggcacaactgcctcaccagacttagaaaatggaagcccactt
ggcgtctctgaggagacatctggcgtggaggcggggcgagatacctattcagaaattgaa
agggaggcgtcaaaatcaactggagatggcgatgataacagcgacggtggcgtctccacc
cacgtcagcccagaaagtgaaagagcagacccagaaagttcaagcgacaccaacgatttt
cacaccgaggaggactttgacaatgtcgtcaacagtgaggaaagcctgtcccatcaccac
ttagaggaagagggggaaacagaggaggaagatgaagaacgacagctccaggtatgttta
cagtaccgcgggaacaaccgtgaggacgaggatcgggccctagaggagtgggtgacttca
gagacatctgccctcccacgacctcgctggcaagtccttccagcactccgggagcggcag
ctgggttcaagttctcgttttatatatgacgcctgtgggtcaagagcctttgtgcagcgt
ctcagcttacagtatggtcttgatggccatttaggttgtgtgaatactgtgcattttaat
cagcgaggcacctggttggccactggtagtgatgacttgagggtgatagtgtgggactgg
atagggaagcggccagtactggactttgagagtggccacaaaaataatgtcttccaggcc
aagttccttcctaattgtggtgattccatcttggccacctgttcccgtgatggccagatt
cgagtggcagaactatctgctccaacatgtgggaagaatactaagtgtgtggccaagcat
aagggagcttctcacaagttggctctggagccagactccccttttaagttcctaacttca
ggtgaagatgctgttgtttataccattgatctcagacaagggcaaccagcttcaaaagtg
gtggtaacaaaagagaaggagaagaaagtgggactatatacaatccatgtgaatcccagc
aatatttaccagtttgcagtgggtggacgagatcagtttgtaaggatttatgaccagaga
aaaattgatgagaatgacaacaatggagtactcaagaaattctgccctcatcacctactc
aactgtgataccaaaacaagtatcaccagtctggtgtacaaccatgatggcacagagctc
ctagtgagctacagtgatgaagatatttacctcttcaactcctctgacagtgatggagct
caatatgttaagagatataagggccacagaaatgatgccacagtgaaaggtgtgaatttc
tatggtcccagaagtgagtttgtgatgaccggcagtgattgtgggcacatctttctctgg
gagaaagcatcttgccagattattcagttcatggtgggagacaagggaggtacagtcaac
tgtcttgaagcccatcctcacctacctgtgatggcaactagtggcctggaccacgatgtg
aagatctgggcacccacagctatagcttccactgagcttactgggttaaagaatgtgctt
aggcagaacaagcagaaaagagatatagatagcttgtaccaccctgacatgtttgacagt
cacatgctttggttcctgacgagtcgcctgacacagagaaatcattaccagcactgggga
ggtcctggccttcagggcatgagtgcagacttacttgagtcttccagcacctcagataca
tctgaagaagaagaagaagaaagccaagactaagtgcagtgtttgccatcctga
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