Sciurus carolinensis (gray squirrel): 124971430
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Entry
124971430 CDS
T08117
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ncar00535
]
124971430
Proteoglycans [BR:
ncar00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
124971430
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
DUF5928
Motif
Other DBs
NCBI-GeneID:
124971430
NCBI-ProteinID:
XP_047391170
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Position
X:34306805..34324947
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AA seq
490 aa
AA seq
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MEGLGQPRGSLEAQDHADPQDAVILGLPSTQASEACLRACPAACTCSTAERSCSVRCDRA
GLLRVPAEFPCEATSIDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPR
LAELRLAHNGELRYLHARTFAALGRLRRLDLAACRLFSVPERLLAELPALRELAAFDNLF
RRVPGALRGLANLTHAHLERGRIEAVASSSLLGLRRLRSLSLQANRVRVVHAGAFGDCGA
LEHLLLNDNLLAELPVHAFRGLRRLRTLNLGGNALGLVARAWFADLAELELLYLDRNSIS
FVEEGAFQNLSGLLALHLNSNRLTVLSWAAFQPGFFLGRLFLFRNPWRCDCHLEWLRDWI
EGSGRVADVPCASPGSVAGLDLSQVAFERSSDGLCVDPEELNLTTSSPGSSPEPVATTVS
RFSSLLSKLLAPRVPVEEAANSTGGLVNASLSDSLPSRGVGGSGHKTTLLFISWALLSAA
HSMVVGLQRD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctggggcagcccaggggctccttggaggcgcaggaccacgcagatccccag
gacgcggtgatcctcggcctgcccagcacccaggcctccgaggcctgcttgcgcgcctgc
ccggcggcctgcacctgcagtacggcagagcggagctgctcagtgcgctgcgaccgtgcg
ggcctcctgcgggtgccggccgagttcccgtgcgaggcaacctccatcgatctggaccgg
aacggcctgcgcatcctgggggagcgggcctttggcacgctgccgtctctgcgccgcctg
tctctgcgccacaacaacctgtcctttatcacgccgggcgccttcaagggtctgccgcgg
ctggcggagctgcgcctggcgcacaacggcgagctgcgctacctgcacgcgcgcaccttc
gccgcccttggccgcctgcgccgcctcgacctggccgcgtgccgcctgttcagcgtgccc
gagcgcctcctggccgagctgccggccctgcgcgagctcgccgccttcgacaacctgttc
cgccgcgtgccgggcgcgctccgcggcctggccaacctgacacatgcgcacctggagcgc
ggccgcatcgaggccgtggcctccagctcgctgctgggcctgcggcgcctgcgctcactc
agcttgcaggccaaccgcgtccgcgtggtgcacgccggtgccttcggcgactgcggcgcc
ctggagcatctgctgctcaacgacaacctgctggccgagctgccggtccacgccttccgc
ggcctgcggcgcctgcgcacgctcaacctgggcggcaacgcgctgggcctggtggcgcgc
gcctggttcgccgacctggcggagctcgagctgctctacctggaccggaacagcatctcc
ttcgtggaggaaggcgccttccagaacctgtcgggcctgctggcgctgcacctcaacagc
aaccgcctcacggtgctctcctgggccgccttccagcccggcttcttcctgggacgcctc
ttcctcttccgtaatccgtggcgctgcgactgccacctggagtggttgcgggactggata
gagggctctgggcgcgtggccgacgtgccctgcgcctcccctggctccgtggccggcctg
gacctcagccaggtggctttcgagcgctcctccgatggcctgtgtgtggacccagaggag
ctgaacctcactacgtctagtccaggctcgtccccagagcccgtggccaccaccgtgagc
aggttcagcagtcttctctccaagctgctggccccaagggtccccgtggaggaggcagcc
aactctaccggagggctggtcaacgcctcgctgtccgacagccttccgtcccgtggggtg
ggcggctcgggtcacaagaccaccttgctcttcatctcctgggccctgctcagtgcggcc
cactccatggtggttggcctgcagagggactga
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