KEGG   Sciurus carolinensis (gray squirrel): 124971466
Entry
124971466         CDS       T08117                                 
Name
(RefSeq) Y-box-binding protein 3-like
  KO
K06099  cold shock domain protein A
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124971466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124971466
   03041 Spliceosome [BR:ncar03041]
    124971466
Transcription factors [BR:ncar03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    124971466
Spliceosome [BR:ncar03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    124971466
SSDB
Motif
Pfam: CSD DUF8529 OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 124971466
NCBI-ProteinID: XP_047391187
LinkDB
Position
X:46662700..46663830
AA seq 376 aa
MNEAGEGTTTEMATSVSPQAAQEQLISLGSGDPPGALVAGTLSGDPITKAAVAGGTKGKA
PKKVIAKRVRGSVKWFNVKNGYGFISRHDTQEDVFVHQTAITRNNPHKYQRSVGDGETVE
FDVVQGERGTEAANVTGPEGAPVEGSRYAANRPRFRPGCYIHHREPPPGRSRDAKDHLDE
GEDSCAGFTACFTVAQAPRRYLPSRPQDQPLWRFPPVRRPQVLALRPSLIPHPHGPWAPR
LAWSVPASKPEVAPRRGLGPSYLLSRPRGRGIPQEPAPSPANSEELEAENKEGTRKAGSP
QQRPPPRYGSRRPNNPGHSPQKVQDTESQDLQEKEDKTTGKGPVESPICAVVPEKSGAAE
KEDPDVPDTPSAAQAQ
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgaatgaagctggagagggcaccaccacagagatggccacctcagtctctccccaagcc
gcgcaggaacaactcatatcgttgggaagcggagatcctccaggggctctagtggcaggc
accctgagcggggacccgatcacgaaggccgctgtagcagggggcaccaagggaaaggct
cccaagaaggtcatcgccaagagggtgcgaggctccgtcaaatggtttaatgtgaagaat
gggtacggcttcatcagcaggcatgatactcaggaagatgtgttcgttcaccagaccgct
atcacccggaacaatcctcacaagtaccaacgcagtgtgggcgatggagagacggttgag
ttcgatgtggtgcaaggtgagcggggcaccgaggctgctaacgttactggaccggagggt
gctccagtcgagggcagccgctatgccgctaaccgtccccgcttccgcccaggctgctac
attcaccaccgtgagccaccaccaggaagatcccgggacgccaaggaccatctggatgaa
ggtgaggacagctgcgcgggcttcaccgcatgcttcacggtagcccaggctccgcggcgc
taccttcccagtcgacctcaagatcaaccactgtggcgcttcccaccggtccgcaggccc
caggtcctggcgctccgcccatcgctcatccctcacccccatggcccatgggcccctcgc
ctggcctggtccgtgccagcctcaaagcctgaggttgcaccgaggcgggggctgggcccc
agctacttgctgagtcgcccgaggggcaggggcatacctcaggagccagcaccctcacca
gccaactctgaggagctggaggcagaaaacaaggagggcactcgcaaagcaggcagccct
cagcagagacccccaccgcgctatggatcccgccgtcccaacaacccgggccacagtccc
cagaaggtacaagacactgagagccaagaccttcaggagaaagaggataagaccactggg
aagggcccagttgaaagtcccatttgtgccgttgtgcccgagaagagcggcgctgctgag
aaggaggaccctgacgtcccagataccccctcggcagcccaggcccagtag

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