Sciurus carolinensis (gray squirrel): 124971566
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Entry
124971566 CDS
T08117
Name
(RefSeq) transcription initiation factor TFIID subunit 7-like
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124971566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124971566
03036 Chromosome and associated proteins [BR:
ncar03036
]
124971566
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124971566
Coactivators
SAGA/TFTC/STAGA complex
124971566
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124971566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
NSUN5_fdxn-like
Mit_KHE1
Motif
Other DBs
NCBI-GeneID:
124971566
NCBI-ProteinID:
XP_047391228
LinkDB
All DBs
Position
X:complement(83183302..83199969)
Genome browser
AA seq
503 aa
AA seq
DB search
MECPEGEVPNSSENDSTVAQTSEVMNYQESQISVDHGTETVCERGAETVDNKDTEIPADQ
DAKADADSSTTPADKTTLENSLEVKEMSKSQDEPPHELESQFILRLPPEHASTVRSLIHS
GSVKMKDKLKIDLSPDRRRAVVEVEGVSLSAKLVDLPCVIGSLKTLDKKTFYKTADISQM
LVCSADGDLHSSPEEPITSTDLNNTGNNKKETEKKYIWKHGITPPLKNVRKKRFRKIKKK
TADSKQIEEITFPEYTDSPDVEKEVKRLLCSDAEAVSARWEVIADDETKEIESQGCIPSF
AISPGMSGYKQGHISEYDMLPEMFSDSSSNNHNDEDEDEDEEDEDENEEEEEDDDEDDED
EDEDEEEEEIEEDDYEEALERELQAKIFESSQYETKESINSIVMEIQKQIHYKEKKLQEI
QSRAQRQKDLIRKVENLTLKSHLQSLLERLKIQEKQKNEQVRRIVVDKSCNEVIRVKIHS
FSSDDQWNEKALGYDVVFMELAV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagtgccctgagggagaggtccccaattcctcagaaaatgattcaacagtagctcaa
acatcggaagtaatgaactaccaagaatcccagatttctgttgaccatggtactgaaact
gtttgtgagcgtggcgccgaaactgtcgacaacaaagacacagaaattcctgccgatcaa
gatgctaaagccgatgccgacagcagcaccacacctgctgacaaaactactctagaaaac
tcactggaagtcaaagagatgagtaaaagtcaggatgaaccgcctcatgaacttgagagc
cagtttatattgcgtctgcctccggagcatgcttctactgtcaggagcctaatacattct
ggaagtgtcaaaatgaaggataaactaaaaattgacttatctcctgatagacgtcgtgcg
gttgttgaggtagaaggtgtctcactatctgctaagctggttgatttgccttgtgttatt
ggaagcctgaaaactcttgataaaaaaaccttttataaaacagcagatatttcccagatg
cttgtgtgcagtgctgatggtgatcttcactcttctccagaagaaccaattacctctact
gatctcaataataccgggaataataaaaaggagacagaaaaaaaatacatctggaagcac
ggcattactccaccacttaagaatgtcagaaagaaaaggttccggaaaattaaaaaaaag
actgctgattccaaacaaattgaagaaatcacctttcctgagtacactgactctccagat
gtggaaaaagaagtgaagagactgctgtgttcagatgctgaagctgtcagtgcccgatgg
gaagtaattgctgatgatgaaaccaaggaaatagaaagtcaaggctgcattccaagcttt
gcgatatcccctggaatgagtggctacaagcagggacatatttcagaatatgatatgctt
ccggagatgttcagtgattctagcagtaacaatcataatgacgaggatgaggatgaggat
gaggaagatgaggatgagaatgaggaagaggaggaagatgacgatgaagatgatgaagat
gaagatgaagatgaagaagaggaagagatcgaggaagatgattatgaagaggctctagaa
agggagctacaggccaagatttttgaatctagccagtatgagacaaaggaaagtatcaat
tcaatagtcatggaaattcagaagcagattcattacaaggagaaaaagctccaagagatt
cagagtagagcacaaagacaaaaggatctcatcaggaaagtggaaaacctgactctcaag
agtcatttacagtctctgctggagaggcttaagatacaggaaaaacaaaaaaacgagcag
gtgagaagaatagtggtggacaaatcttgtaatgaggttatcagggtgaaaattcactca
ttcagcagtgatgaccaatggaatgaaaaagccctgggttacgatgttgttttcatggag
ctagcagtctag
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