Sciurus carolinensis (gray squirrel): 124971840
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Entry
124971840 CDS
T08117
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04518
Integrin signaling
ncar04810
Regulation of actin cytoskeleton
ncar05212
Pancreatic cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
124971840
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124971840
09160 Human Diseases
09162 Cancer: specific types
05212 Pancreatic cancer
124971840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124971840
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124971840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
CH
SH3_9
SH3_1
PH
SOS1_NGEF_PH
DUF2204
ZapB
CAMSAP_CH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
124971840
NCBI-ProteinID:
XP_047391671
LinkDB
All DBs
Position
X:complement(115048524..115159172)
Genome browser
AA seq
771 aa
AA seq
DB search
MNPEERIVTWLISLGVLDSPKKTICDPEEFLKSSLKNGVVLCKLINRLIPGSVEKYCLEP
QTESSCINNINGFLKGCTTLQVEVFEPDDLYSGVNFSKVLSTLLAVNKATEDQLSERPCG
RSSSLSAANSSQTNPQGAVSSTAPGLQRQAKAVEMTENGSHQLIVKARFNFKQTNEDELS
VCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIKSSERPLSPKAVKGFETAPLTKN
YYTVVLQNILDTEREYAKELQSLLVTYLRPLQSNNNLSTVEFTSLLGNFEEVCTFQQTLC
QALEECSKFPENQHKVGGCLLNLMPHFKSMYLAYCANHPSAVNVLTQHSDDLEQFMENQG
ASSPGILILTTSLSKPFMRLEKYVTLLQELERHMEDTHPDHQDILKAIIAFKALMGQCQD
LRKRKQLELQILSEPIQAWEGEDIKTLGNVIFMSQVLVQYGTCEEKEERYLMLFSNVLLM
LSASPRMSGFIYQGKIPVAGMVVTRLDEIEGNDCTFEITGNIVERVVVHCNNNQDFQEWL
EHLNRLTKGPASGGSLSKTSSSCSAHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLR
PSAALGYKERMSYILKESSKSPKTMKKFLHKRKTERKPSEEEYVIRKSTAALEEDAQILK
VIEAYCTSANFQQGARKDSVPQVLLPEEEKLIIEETRSNGQTIIEEKSLVDTVYALKDEV
KELKQENKRMKQCLEEELKSRRDLEKLVRRLLKQTDECIRAESSSKTPILP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaagagcgaatcgtgacatggcttatatctttgggagttttagattcccca
aaaaagaccatctgtgatccggaggagttcttgaagtcctcgctgaaaaatggggtagtg
ctgtgcaaactgatcaacagacttatccctggatcagtggaaaagtattgtctggagccc
caaactgaatccagctgcatcaataacatcaatggtttcctgaaaggatgtacaaccctc
caagtggaggtatttgaacccgatgacctttattcaggggttaatttctccaaggttctg
agtactcttttagctgtcaacaaagcaacagaagatcagctctcagaaagaccatgtgga
cgttcctcttctcttagtgctgctaatagttcccagacaaacccccagggagcagtttct
agcacagctccagggctgcaaaggcaggcaaaggcagtggagatgacggaaaatggaagt
caccagttgatagtgaaggcaagattcaactttaagcagactaatgaagatgaactgtca
gtctgtaaaggggatatcatttatgtcactcgagttgaagaaggaggctggtgggaaggc
acattaaatgggagaacaggctggttccctagtaattatgtccgagaaattaaatccagt
gagagacctctgtcccccaaggctgtcaaaggatttgaaactgctccacttaccaagaat
tattatactgtggtgttacagaacatcttggacactgaaagagaatatgctaaagaactt
cagtctcttcttgttacttacttaagacccttgcaatccaataacaatctgagtactgtg
gagtttacatctttactgggaaactttgaggaagtatgtacatttcaacagacactctgt
caagccttggaagaatgttcaaagtttccagaaaaccaacacaaagtaggaggttgtctg
ctgaatctcatgcctcattttaaatctatgtatctggcttattgtgcaaatcatccatca
gctgtaaacgtgcttacccagcacagtgatgatctggaacaatttatggaaaatcaaggt
gcatccagcccaggtatcctcattttaaccacaagcctcagtaagccattcatgcgactg
gaaaagtatgttactctcttacaagagctggagcggcacatggaggatactcatccagat
catcaggatattctgaaagcaatcatagcatttaaagcgcttatgggacagtgccaagat
ctgagaaagagaaaacaactggagttgcagatactctcggaacctattcaagcgtgggaa
ggggaggatattaaaaccttgggaaatgtgatttttatgtcacaagtattggtgcaatat
ggaacatgtgaggaaaaagaggagcgataccttatgttattttcaaatgtcttgctaatg
ttatctgcaagtcctcggatgagtggctttatctatcagggaaaaataccagtagcagga
atggtggtgactagattagatgaaattgaagggaatgactgcacatttgaaatcacaggt
aacatagtagagagagttgtggtccattgcaacaacaaccaggacttccaggaatggctg
gagcatctgaacagactgaccaaaggacctgcctctggaggttcattatccaaaacatca
tcatcgtgtagtgctcattcctcttttagctctactggacagccccgaggacccttggag
cctcctcaaattataaaaccgtggagtttaagttgtctacgacctgcacctccacttaga
ccatcagcagcactagggtataaagagaggatgtcttatatcttaaaggagtccagtaaa
agccccaaaacaatgaagaagtttcttcataaaagaaagactgagagaaaaccatcagag
gaggaatatgtgattagaaaaagtacagctgctctggaagaggatgctcagattcttaag
gtgattgaagcctactgcaccagtgccaattttcaacaaggtgctcgcaaagattctgtt
ccacaagtcttactccctgaggaagagaaactcatcattgaagaaaccagaagcaatggc
cagaccataattgaagaaaagagcctcgttgatacggtttatgccttgaaggatgaagtc
aaagaactgaagcaggagaataaaagaatgaagcagtgcctggaagaagaattgaagtca
agaagggatctagaaaagctagtccggaggctgttgaagcaaacagatgagtgcattcga
gctgaatccagtagcaagaccccgattcttccataa
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