Sciurus carolinensis (gray squirrel): 124971856
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Entry
124971856 CDS
T08117
Name
(RefSeq) G-patch domain and KOW motifs-containing protein-like
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124971856
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124971856
Complex C
U4/U6.U5 tri-SnRNP related factors
124971856
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
SH3_KIN17_C
KOW7_SPT5
KOW2_Spt5
KN17_SH3
KOW5_SPT5
Motif
Other DBs
NCBI-GeneID:
124971856
NCBI-ProteinID:
XP_047391711
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Position
X:complement(40519497..40543508)
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AA seq
483 aa
AA seq
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MADAEDDVLQPAASLAAPISFGFTRTSTRRRLADPKDGEGSAPEKDFLKTVEDRELQSVK
PTEAPKELVIPLIQNGYRRQTLTQMTGPSTDTEALVDGVLSQAVKELIEESKKSLEEREN
AGVNPTLAIPMIQKECTPNGEGADSEPRAETVPEEADYEAVPVEAYGLAMLRGMGWKPGE
GIGRTFNQVVKPRVNSLRPKGLGLGANLTEAQALTSTGSESLLRSDGEQEKDKEDQPQGL
VPGGAVVVLSGPHRGLYGKVEGLDPDNVRAMVRLAVGSRMVTVSEYCLRPVSQQEFDTNS
LHLGQVSKTSLGQQNGTNSSWKALQNQDLHVRWEDSERKRKHPPDWKDEPAAKNKKAAPM
TQHWLHRDLRVRFVDKLHKGGQYYNTKMTIEDVLSPDTCVCRTDEGQVLEGLREDMLETL
VPKVEGNRVMVVLGPKAGRVGHLMGRDRARSRALVQLRRDNQLVELHYDAVCQYMGPSDS
DED
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagaagacgatgttttgcagccagcggcatctttagctgccccaatttct
ttcggcttcactcgcacgtccacccggaggcgtctggcggacccgaaagacggcgaaggt
tcggccccagagaaggatttcttgaagaccgtggaagacagggagctgcagagtgtgaag
cccacagaagctcccaaagaactggtcatcccgttgatccagaatggctatcgcaggcag
acgctgacacagatgactgggccatccacagatactgaggccttggtggatggagtgctg
tcccaggcagtgaaggaactcattgaggaatccaagaagtctctggaggagagagagaat
gcgggtgtcaaccccacgctcgctatccccatgatccagaaagaatgcacccccaacggg
gaaggggcagacagcgaaccccgggctgagacagtgccagaggaagctgattatgaggca
gtccctgtcgaagcctacgggctggccatgctgcggggcatgggctggaaacctggtgag
ggcatcggtcgcactttcaatcaagtagtgaagccccgtgtcaactcactgaggcccaag
gggctagggctgggtgcaaacttgactgaggcccaggccttgacctccactggttctgag
agcctactgaggtcagatggggagcaagagaaagataaggaagaccagcctcaagggctc
gtgcctggaggagctgtggttgtcctttctggccctcaccgaggtctctatggaaaggtg
gaaggcctggatcctgacaatgtgcgggccatggtccgtctagcagtgggcagccgcatg
gtgactgttagtgaatactgtctgcggcctgtttcccagcaagagtttgacacaaactcc
cttcatcttggccaggtgagcaaaacttcattgggacaacagaatggaacaaactcatca
tggaaggccctccagaatcaagacctccatgtccggtgggaagactcagaaaggaagcgg
aaacaccctccagactggaaggatgagcctgcagccaagaataagaaagcagcccccatg
actcagcactggttacacagggacctacgtgtgcggtttgtggacaagctgcacaagggt
ggccagtattacaacaccaagatgacaattgaagatgtcttgagcccagatacctgtgtg
tgtcggacagatgaaggccaagtcctggaaggcctgagggaagacatgctggagaccctg
gtccccaaggtagaaggcaaccgtgtgatggtggtactggggccaaaggctggaagggtg
ggacacctgatgggccgagacagagcaaggagccgggctttggtgcaactgcggagagat
aatcagttggtagagctacactatgacgctgtctgtcaatacatgggccccagtgactca
gatgaagactga
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