Sciurus carolinensis (gray squirrel): 124971968
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Entry
124971968 CDS
T08117
Name
(RefSeq) gamma-aminobutyric acid receptor subunit theta-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04723
Retrograde endocannabinoid signaling
ncar04727
GABAergic synapse
ncar05032
Morphine addiction
ncar05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124971968
04082 Neuroactive ligand signaling
124971968
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124971968
04723 Retrograde endocannabinoid signaling
124971968
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
124971968
05033 Nicotine addiction
124971968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124971968
Ion channels [BR:
ncar04040
]
Ligand-gated channels
GABA-A
124971968
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
COPI_C
Motif
Other DBs
NCBI-GeneID:
124971968
NCBI-ProteinID:
XP_047391979
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Position
X:129000229..129017307
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AA seq
639 aa
AA seq
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MGIRGMLRAAALLLLIRTWLAESYDPSPTPKFHFEFSSTMPEVVLDLFNCKNCANEAVVH
KILDRVLSKYDVRLRPNFGGAPVPVKISIYVSSIEQISEVNMDYTITMIFHQTWKDSRLA
YYETDLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTVENRVFQLHPDGTVQYGIRLTTT
AACSLDLHKFPLDKQACKLEVESYGYTVEDVVLSWEDNENAIHMTEELHIPQFSFLGRTI
TSKEVYFYTGSYMRLILKFQVQREVGSYLVQVYWPTVLTTILSWISFWMNYDSSAARVTI
GLTSILVLTTIDSHLRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQGPRR
HRRRHRRPRRVLARYHYQEVVVGNVQDGLINVEDGFGSLPTSPAQAPLASPESLGSLAST
SEQAQLAIPESLSPLSSLSGHAQLATGESLSDLPSTSQQALHGYGIHFNGFHSDDTITPT
KIRNRAEALDHAETYDNEDSEDDLSLDKNHGHGPSRKAMQYLGQRCVQEGNWDLDEIQSL
HDDINVESRSLDLEEQRKDDNDSIWSLDDEELMACDLEKDTSSESEDSCPPSPGCSFNEG
FSFQLFNPDHVPKVDRWSRFLFPLSFGLFNVVYWLYHIY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggcatccgaggcatgctgcgagccgctgcgctcctgctgctcatcagaacctggctc
gcagagagctatgaccccagtcccaccccaaaattccacttcgagttctcctccaccatg
cccgaagtcgtcctggacctcttcaactgcaaaaattgtgcaaatgaagctgtggttcat
aagattttggacagggtgctgtcgaaatatgatgtccgactgagaccaaattttggaggt
gcccctgtgcctgtgaaaatatctatctatgtctccagcattgaacagatctcagaagta
aatatggactatacaatcacaatgatttttcatcagacctggaaggattctcgcttagca
tactatgagaccgacctgaacctgaccctggactatcggatgcatgaaaagttgtgggtc
cctgactgctactttgtgaatagcaaggatgcttttgtgcatgatgtaactgtggaaaat
cgtgtatttcagcttcacccagatggaacagtgcagtatggcatccgactcaccaccaca
gcagcctgttccctggatctgcacaaatttcctctagacaagcaggcctgcaagctggag
gtggagagctatggctacacagtcgaagacgttgtcttatcctgggaagacaacgagaat
gccatccacatgactgaggagctgcacatcccccagttttctttcttgggaaggacaatt
actagcaaggaggtgtacttttacacaggttcctacatgcgcctgatactgaagttccag
gtccagagggaagttggcagctatcttgtgcaggtttattggcccactgtcctcaccacc
atcctctcttggatatcattttggatgaactatgattcctctgcagccagggtgacaatt
ggcctaacttcaatcctcgtcctgacaaccatcgattcacatcttcgggataaactcccc
cacatttcctgtatcaaggccattgacatctatatccttgtgtgcttgttcttcgtattc
ctgtccttgctggagtatgtctacatcaactatcttttcttcagccaaggacctcgacgc
catcgtaggcgacacaggagacccagaagagtccttgcccgctaccactaccaggaagta
gtggtgggaaacgtgcaggatggcctgattaacgtggaagatggattcggctctcttccc
accagcccagcacaggcccccctggcaagcccggaaagcctcggctctttggcgtccacc
tcagagcaggcccagctggccatcccggaaagcctcagtccactttcttccctctcaggc
catgcccagttggccactggagaaagcctgagtgatctcccctccacctcccagcaggcc
cttcatggctatggtattcactttaatggcttccatagtgatgacactattactcccacc
aaaatccgaaaccgtgccgaggcccttgaccatgctgagacctatgacaacgaagattct
gaagatgacctgagcttggataagaaccatggccatggccccagccggaaagccatgcag
taccttggccagaggtgtgtgcaagaaggaaactgggaccttgatgagatccagagctta
catgatgacatcaatgtcgagagccgctcccttgaccttgaggaacaacgcaaggatgat
aatgacagtatctggagccttgatgatgaggagctcatggcctgtgacctagagaaggac
actagctcagagtctgaggacagttgcccaccaagccctgggtgctccttcaatgaaggg
ttctctttccagctctttaacccagaccatgtcccgaaggttgacaggtggtcccgattc
ctcttccctctttcctttggcctgttcaatgttgtttactggctgtatcatatctactag
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