Sciurus carolinensis (gray squirrel): 124971991
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Entry
124971991 CDS
T08117
Name
(RefSeq) tumor necrosis factor receptor superfamily member 27 isoform X1
KO
K05163
tumor necrosis factor receptor superfamily member 27
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124971991
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124971991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ncar04050
]
124971991
Cytokine receptors [BR:
ncar04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
124971991
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
U9-ORF
Motif
Other DBs
NCBI-GeneID:
124971991
NCBI-ProteinID:
XP_047392009
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Position
X:complement(50202317..50234744)
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AA seq
299 aa
AA seq
DB search
MDCQENEYWDQWGRCVTCQQCGPGQELSKDCGYGEGGDAYCTACPPRRYKSSWGHHRCQT
CITCAVINRVQKANCTATSNAVCGDCLPRFYRKTRIGGLQDQECIPCTKQTPTSEVQCAF
QLSLVKADAPTVPPQEATLVALVSSLLVVFTLAFLGLFFLYCKQFFSRHCQRVAGGSLQF
ETDEAVEEESLFPVPPGQETSPESPVSESIFETQPLNPILDDDCSSTRGFPTQESFTMAS
CASESHSHWVHTPIECTELDLQKFSSSASYSGAETLGGNTTDSSGDRLELNVPFEVPSP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggattgccaagaaaatgagtactgggaccagtggggacgctgtgtcacatgccaacag
tgtggtcctggacaagagctctccaaggattgtggttatggagaaggtggagatgcatac
tgtacagcttgccctcctagaaggtacaaaagcagttggggccaccacagatgtcagact
tgcatcacctgtgctgtcatcaatcgtgtccagaaggccaactgcacagctacctctaat
gcagtctgtggggactgtctgcctaggttctaccgaaagacacgcattggaggcctacag
gaccaagagtgtatcccatgcacaaagcagacccccacctctgaggttcagtgtgccttc
cagttgagcttagtgaaggcagatgcacccacagtgccccctcaggaggcaacacttgtt
gcactggtgagcagtctgctagtggtgtttaccctggccttcctggggctcttcttcctc
tactgcaagcagttcttcagcagacattgccagcgtgttgcaggaggttcgttgcagttt
gagactgacgaggcagtggaggaggaatctctcttccctgtaccacctggccaggagacc
agtcctgagtccccagtgagtgagagcatctttgagacccagccacttaaccccatcctg
gatgacgactgcagctcgactcgtggcttccccacacaggagtcctttaccatggcctcc
tgcgcttcagagagccactcccactgggtccacacccccatcgaatgcacagagctggac
ctgcaaaagttttccagctctgcctcctattctggagccgagaccttgggtgggaataca
actgacagctctggagacaggctggagctcaatgtgccctttgaagttcctagcccttaa
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