Sciurus carolinensis (gray squirrel): 124972059
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Entry
124972059 CDS
T08117
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00061
Fatty acid biosynthesis
ncar00071
Fatty acid degradation
ncar01100
Metabolic pathways
ncar01212
Fatty acid metabolism
ncar03320
PPAR signaling pathway
ncar04146
Peroxisome
ncar04216
Ferroptosis
ncar04714
Thermogenesis
ncar04920
Adipocytokine signaling pathway
Module
ncar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124972059
00071 Fatty acid degradation
124972059
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124972059
09143 Cell growth and death
04216 Ferroptosis
124972059
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124972059
03320 PPAR signaling pathway
124972059
09159 Environmental adaptation
04714 Thermogenesis
124972059
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ncar01004
]
124972059
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124972059
Enzymes [BR:
ncar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124972059
Lipid biosynthesis proteins [BR:
ncar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124972059
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of breast milk
124972059
Exosomal proteins of breast cancer cells
124972059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124972059
NCBI-ProteinID:
XP_047392153
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All DBs
Position
X:complement(90826719..90918732)
Genome browser
AA seq
711 aa
AA seq
DB search
MKLKLNVLTIILLPVHLLITIYSALIFIPWYFLTNAKKKNAMAKRIKAKPTSDKPGSPYR
SVTHFDSLAVIDIPGADTLDKLFDHAVSKFGKKDSLGTREILSEENEMQPNGKVFKKLIL
GNYKWMNYIEVNRRVNNFGSGLTALGLKPKSTIAIFCETRAEWMIAAQTCFKYNFPLVTL
YATLGKEAVVHGLNESEASYLITSVELLESKLKTALLDISCVKHIIYVDNKTVNKAEYPE
GFEIHSMQSVEELGSKPENSSIPPNRPTPSDMAIVMYTSGSTGRPKGVMMHHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSK
GDCTVLKPTLMAAVPEIMDRIYKNVMSKVQEMNYIQKTLFKIGYDYKLEQIKKGYDAPLC
NLLLFKKVKALLGGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEV
TDYTTGRVGAPLICCEIKLKDWQEGGYTVHDKPNPRGEIVIGGQNISMGYFKNEEKTAED
YSVDENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDN
ICAFAKSDQSYVISFVVPNQKKLTLLAQQKGVEGTWVDICNNPAMEAEILKEIREAANAM
KLERFEIPIKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLKDIERMYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaactaaatgtgctcaccattattttgctgcctgtccacttgttaataaca
atatacagtgcccttatatttattccatggtattttcttaccaatgccaagaagaaaaac
gctatggcaaagagaataaaagctaaacccacttcagacaaacccggaagtccatatcgc
tctgtcacacacttcgactcactagctgtcatagacatccctggagcagacactctggat
aaattatttgaccatgctgtatccaagtttggaaagaaggatagccttgggaccagggaa
atcctaagtgaagaaaatgaaatgcagcctaatggaaaagtcttcaagaagttaattctt
gggaattataaatggatgaactacatcgaggtgaaccgcagagtgaataattttggtagt
ggacttactgcattgggactgaaaccaaagagcaccattgccattttctgtgagaccagg
gctgaatggatgattgcagcacagacctgctttaagtacaactttcctcttgtgacttta
tatgccacgcttggcaaagaagcagtagttcatggactgaatgaatctgaggcttcttat
ctgattactagtgttgaacttctggaaagcaaacttaagactgcactgttagatatcagt
tgtgttaagcacatcatttatgtggataataagactgtcaataaagcagaataccctgaa
ggatttgagattcacagcatgcaatcagtagaagagttgggatccaaaccagaaaactca
agcattcctccaaatagaccaactccttcagacatggccattgtcatgtatacgagtggt
tctactggccgacctaagggagtgatgatgcatcatagcaatttgatagctggaatgaca
ggccaatgtgaaagaatacctggactaggaccaaaggacacatatattggctacttacct
ttggctcatgtgctagaattgacagcagagatatcttgcttcacctatggctgtaggatt
ggatattcctctccacttacactgtctgaccagtccagcaaaatcaaaaagggaagcaaa
ggagactgtactgtactgaagcctacacttatggctgctgttccagaaatcatggataga
atttataagaatgttatgagtaaagttcaagaaatgaattatattcagaaaactctattc
aagatagggtatgattacaaattggagcaaatcaaaaagggatatgatgcacctctttgc
aatctgttactctttaaaaaggtgaaggctctgctgggagggaatgtccgtatgatgctg
tcaggtggggccccattgtctcctcagacacaccgattcatgaatgtctgcttctgctgc
cccattggccagggttatggactgacagaatcatgtggtgctgggacagttactgaagtt
actgactatactactggcagagttggggctcctcttatttgctgtgaaattaagctaaaa
gactggcaggaaggtggttatacagttcatgacaaaccaaaccccagaggtgaaattgta
attggtgggcagaatatctccatgggatacttcaaaaatgaagagaaaacagcagaggat
tattctgtggacgaaaatggccaaagatggttttgtactggtgatattggagaattccat
cctgatggatgtttacagattatagatcgaaagaaagatctggtgaaattacaagcggga
gaatatgtgtctcttgggaaagtagaagctgcattgaagaactgtcctcttattgacaac
atctgtgcttttgccaaaagtgaccagtcctatgtgatcagttttgtggttcctaatcag
aaaaagttaacacttttggcacaacagaagggggtagaaggaacttgggttgatatctgc
aataaccctgccatggaagccgaaatactgaaagaaatccgagaagctgcaaatgccatg
aaattggagagatttgaaattccaatcaaggttcgcttaagcccagagccatggacccct
gaaactggtttggtaactgatgctttcaaactgaaaaggaaggaactgaagaaccattac
ctcaaagacattgagcgaatgtatgggggcaaataa
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