Sciurus carolinensis (gray squirrel): 124972137
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Entry
124972137 CDS
T08117
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
124972137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124972137
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
124972137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
124972137
NCBI-ProteinID:
XP_047392328
LinkDB
All DBs
Position
X:54323922..54346240
Genome browser
AA seq
2181 aa
AA seq
DB search
MAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAK
NVNFNPAKISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNFWLVTGRSQNAINTWFTDL
AGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTSAYYAAITETKVKKRHV
DPFIEWTQIITKYLWEQLQKMAEYYRPGPAGSGGCGSTIGPLPHDVEVAIRQWDYNEKLA
MFMFQDGMLDRHDFLTWVLECFEKIRPGEDELLKLLLPLLLRYSGEFVQSAYLSRRLAYF
CTRRLALQLDGMSSHSSHVISTQSTSTLPTTPAPQPPTSSTPSTPFSDLLMCPQHRPLVF
GLSCILQTILLCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPEGNSAFTQQVRAK
LREIEQQIKERGQAVEVRWSFDKCQEATAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSL
CNRIFGLGPSKDGHEISSDDDAVVSLLCEWAVSCKRSGRHRAMVVAKLLEKRQAEIEAER
CGESEAADEKGSIASGSLSAPSAPIFQDVLLQFLDTQAPMLTDPRSESERVEFFNLVLLF
CELIRHDVFSHNMYTCTLISRGDLAFGAPGPRPPSPFDDPVDDPERKEAEGSSSSKLEDP
GLSESMDIDPSSSVLFEDMEKPDFSLFSPTMPCEGKGSPSPEKPDVEKEVKPPPKEKIEG
TLGVLYDQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHAIKKITKDILK
VLNRKGTAETDQLAPIVPLNPGDLTFLGGEDGQKRRRNRPEAFPTAEDIFAKFQHLSHYD
QHQVTAQVSRNVLEQITSFALGMSYHLPLVQHVQFIFDLMEYSLSISGLIDFAIQLLNEL
SVVEAELLLKSSDLVGSYTTSLCLCIVAVLRHYHACLILNQDQMAQVFEGLCGVVKHGMN
RSDGSSAERCILAYLYDLYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSESNMRWAPE
FMIDTLENPAAHTFTYTGLGKSLSENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAE
LTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQC
LLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQSDGNKPTVGIR
SSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGSGFTVTGGTEELPEEEGGGGSGG
RRQGGRNISVETASLDVYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSAQAQRL
MQLICYPHRLLDNEDGENPQRQRIKRILQNLDQWTMRQSSLELQLMIKQTPNNEMNSLLE
NIAKATIEVFQQSAETGSSSGSTANNMPSSSKTKPVLSSLERSGVWLVAPLIAKLPTSVQ
GHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLL
TSLYNQVNQIVNNWREDQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAML
LLEIIISGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKL
QKELGEHQSDSLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVS
TKQKISPWDLFEGLKLSAPLSWGWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYYLE
PLPLPPEDEEPPAPTLLEPEKKAPEPPKTDKPGAAPPSTEERKKKSTKGKKRSQPATKTE
DYGMGPGRSGPYGVTVPPDLLHHANPGSISHLSYRQGPIGLYTQNQPLPAGGPRVDPYRP
VRLPMQKLPTRPAYPGVLPTTMTGVMGLEPSSYKTSVYRQQQPAVPQGQRLRQQLQQSQG
MLGQSSVHQMTPSSSYGLQTSQGYTPYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHPST
NPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQTTMLGTMTPLNTQGVQA
GVRSTSILPEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQQILRQQQQQQQ
QQQQQQQQQQQQQQQQQQQQHQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVR
QLQQQLSNTQPQPSTNIFGRY
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcgggatcttgagctacgaacaccggcccctgaagcggccgcggctgggg
cctccggatgtgtaccctcaagatcccaaacagaaggaggatgaactgacggccttgaat
gtaaaacaaggtttcaataaccagcctgctgtctctggggatgaacatggcagtgccaag
aacgtcaacttcaatcctgccaagatcagttccaacttcagcagcattattgcagagaag
ttacgttgtaacaccctccctgacactggtcgcaggaagcctcaagtgaaccagaaggac
aacttctggctggtgactgggcgatctcagaatgccattaacacctggttcactgatctg
gctggcactaaaccactcacacaattagccaaaaaggtccccattttcagtaagaaggaa
gaagtgtttggatacttagccaaatacacagtgcctgtgatgagggctgcctggctcatt
aagatgacttctgcctactatgcagcaatcactgaaaccaaggttaagaagagacatgtt
gaccccttcattgaatggactcagatcatcaccaagtacttatgggagcagctacagaag
atggctgaatactaccggccagggcctgcaggaagtgggggctgtggttccacaatagga
cccttgccccatgatgtggaggtggcaatcaggcagtgggactacaacgagaagctggcc
atgttcatgtttcaggatggaatgctggacagacatgatttcctaacctgggtgctagaa
tgttttgagaaaatccgccctggagaggatgaattgcttaaactactgctgcccctactg
cttcgatactctggggaatttgttcagtctgcatacctgtcccgccgccttgcctacttc
tgtacccggagactggccctgcagctggatggcatgagcagccactcatctcatgttata
tccacccagtcaacaagcacactgcctaccactcctgcccctcagcccccaactagcagc
acaccctccactccctttagtgacctgcttatgtgccctcagcaccggcccctggttttt
ggtctcagctgtatactacagaccatcctcctgtgttgtcctagtgccctggtttggcac
tactcactgactgatagccgaattaagacgggttcaccacttgaccacctgcctattgcc
ccttccaacctgcccatgccagagggcaacagtgccttcactcagcaagttcgtgcaaag
ttgcgggagattgagcagcagatcaaggagcgaggacaggcagttgaggttcgctggtct
tttgataagtgccaggaagccactgcaggctttaccattggacgggtgctccatactttg
gaagtgctggacagtcatagttttgagcgctctgacttcagcaactctctggactctctt
tgtaaccgaatctttggattggggcctagcaaggatgggcatgagatctcttctgatgac
gatgctgtggtatcattattatgtgaatgggctgtcagctgcaagcgttctggtcggcat
cgtgccatggtggtagccaagctcctggagaagagacaggcagagattgaggctgagcgt
tgtggagaatccgaagcagcagatgagaagggttccattgcctctggctccctttctgct
cctagtgctcccattttccaggatgtcctcctgcagtttctggatacacaggctcccatg
ctgacggatccccgaagtgagagcgagcgggtggaattctttaacttggtactgcttttc
tgtgaactgattcgacatgatgttttttcccacaacatgtatacttgcactctaatctcc
cgaggggaccttgcctttggagcccctggtccccggcctccctctccctttgatgatcct
gtcgatgacccagagcgcaaggaggctgaaggcagcagcagtagcaagctggaggatcca
ggactctcagagtctatggacattgaccctagttccagtgtgctctttgaggatatggag
aagcctgacttctcattgttttcccctactatgccctgtgaggggaagggcagcccatct
cctgagaaaccagatgtggagaaggaggtgaagccaccacccaaggagaagatcgaaggg
acccttggggttctttatgaccagccacgacatgtgcagtatgccacacactttcccatc
ccccaggaggagtcatgcagccatgagtgcaaccagcggttggttgtactatttggggtg
ggaaagcaacgagatgatgcccgccatgccatcaagaaaatcaccaaggatatcctgaag
gttctgaaccgcaaggggacagcagaaactgaccagcttgctcctattgtgcctctgaat
cctggagacctgacattcttaggtggggaggatgggcagaagcggcgccgcaaccggcct
gaagccttccccactgctgaagatatctttgctaagttccagcatctttcacattatgac
caacaccaggtcactgctcaggtctcccggaatgttctggagcagatcacgagctttgcc
cttggcatgtcataccacttgcctctggtgcagcatgtacagttcatcttcgacctcatg
gaatattcactcagcatcagtggcctcatcgactttgccattcagctactgaatgaactg
agtgtagttgaggccgagttgcttctcaaatcctctgatctggtgggcagctacactacc
agcctgtgcctgtgtattgtggccgttctgcggcactaccatgcctgcctcatcctcaac
caggaccagatggcgcaggtctttgaggggctgtgtggcgtagtgaagcatgggatgaac
cgatcagatggctcctctgcggaacgctgtatccttgcttatctctatgatctgtacacc
tcctgtagccatttaaagagcaaatttggggagctcttcagcgacttttgctcaaaggtg
aagaataccatctactgcaatgtggagccatcagaatccaatatgcgctgggcacccgag
tttatgatcgacaccctggagaaccctgctgctcataccttcacctacacagggctaggc
aagagtcttagtgagaaccctgctaaccgctacagctttgtctgcaatgcccttatgcac
gtctgtgtagggcaccatgatcccgatagggtgaatgacatcgcaatcctgtgtgcagag
ctgaccggctactgcaagtcactcagtgcagagtggctaggagtacttaaggccttgtgc
tgctcctctaacaatggcacttgtggtttcaatgatctcctctgcaatgtagatgtcagt
gacctgtcctttcatgactccctcgctacttttgttgccatcctcatcgctcgccagtgt
ttgctcctagaagatctgattcgctgtgctgccatcccttcactccttaatgctgcttgt
agcgagcaggactcagagcctggggctcggcttacttgccgcatccttctccacctattc
aagacaccacaactaaatccttgccagtccgatggaaacaagcctacagtaggaatccgc
tcctcctgtgaccgccacctgctggctgcctcccagaaccgcatcgtggatggagctgtg
tttgctgttctcaaggctgtgtttgtacttggggatgcggaactgaagggttcaggcttc
actgtgacgggaggaacagaagaacttccagaagaagagggaggaggtggcagtggcggt
cgcaggcagggtggccgcaacatctctgtggagacagccagtctggatgtctatgccaag
tacgtgctgcgcagcatctgccaacaggaatgggtaggagaacgttgccttaagtcgcta
tgtgaggacagcaatgacctacaggacccagtgttgagtagtgcccaagcccagcgcctc
atgcagctcatctgctacccacatcgacttctggacaacgaggatggggaaaacccccag
aggcagcgcattaagcgtattcttcagaacttggaccagtggaccatgcgccagtcttct
ttggagctgcagctcatgatcaagcagacccctaacaatgagatgaactccctcttggag
aacatcgccaaggctacaattgaggttttccaacagtcagcagagacagggtcatcttca
ggaagcactgcaaacaacatgcccagcagcagcaagaccaaacctgtgctcagctctcta
gagcgctctggtgtatggttggtggcccccctcattgccaaactgcccacctcagtccaa
gggcatgtattaaaggctgctggggaggaactggagaagggtcagcacctgggctcttct
tctcgcaaagaacgtgatcgacaaaagcagaagagcatgtccctgttgagtcagcagccc
ttcttatccctggtgctgacgtgtctgaaagggcaggatgagcaacgtgagggactcctt
acctccctctacaaccaggtgaaccagattgtgaataattggcgagaggaccagtactta
gatgattgcaaaccaaagcagctaatgcatgaggcactcaaactgcggctcaacctggtg
gggggcatgtttgacacagtgcagcgcagcacccagcagaccacagagtgggccatgctc
cttctggagatcatcatcagcggcactgtcgacatgcagtccaacaatgagctcttcact
actgtgttggacatgctgagtgtgctcatcaatggaaccttggctgcagacatgtctagc
atctcacaaggcagcatggaggaaaacaaacgtgcatacatgaacctggtgaagaagcta
cagaaagagttgggggagcatcaatcagacagtctggaaaaggttcgccagctgctgcca
ctacccaagcagactcgagatgtcatcacatgtgagccacagggctcccttattgacacc
aagggcaacaagatcgctggcttcgattccatcttcaagaaggagggtttacaggtttcc
acaaaacaaaagatatctccctgggatctcttcgagggcttgaagctgtctgcaccactc
tcctggggctggtttgggacagtccgagttgaccggcgagtggctcgaggggaggagcag
cagcgcttgctactgtaccacacacacctgaggcctcggccccgtgcctattacctggag
ccgctgccactgccaccagaagatgaggagccaccagctcccaccctgctagaacctgag
aaaaaggctcctgagccccccaaaactgacaaaccaggagctgctccacccagtactgag
gaacgcaagaagaagtccaccaagggcaagaaacgcagccagccagccaccaaaacagag
gactacggcatgggcccgggtcggagtggtccctatggcgtgacagtgcctccagacctc
ctgcaccacgccaaccctggatccatatcccatctgagctacaggcagggccccataggc
ctctatacccagaaccagccactacctgcaggtggccctcgtgtggacccataccgccct
gtgcggttaccaatgcagaagctgccgacccgaccagcttaccctggagtgctgcccacg
actatgactggtgtcatgggcctagaaccttcatcttacaagacttctgtgtaccgacag
cagcaacctgcagtgccccagggacagcgccttcgccaacagctccagcagagtcagggg
atgttgggacagtcatctgttcatcagatgactcccagctcttcctacggcttgcagact
tcccagggctatactccttatgtttctcatgtgggactgcagcaacacacaggccctgca
ggtaccatggtgccccccagctactccagccagccttatcagagcacccacccctctacc
aatcctactcttgtagatcctacccgtcacctgcaacagcggcccagtggctatgtacac
cagcaggccccaacctatggacacggactgacctccactcaaaggttttcacaccagaca
ctacagcagaccaccatgctaggtaccatgactccgctgaatacccagggcgtccaagca
ggcgtccgctcaacttccatcctacctgagcagcagcagcagcaacaacagcaacagcaa
caacagcagcagcagcagcagcagcagcaacaacaacagcaacagcaacagcagcagtac
catatacggcagcagcagcagcagcaacagatcctgcggcagcagcagcaacagcaacag
cagcagcagcaacagcaacagcagcaacagcagcagcaacagcagcaacaacaacaacaa
caccagcagcagcagcaacaggcggctcctccccaaccccagccccagtcccagccccag
ttccagcgccaggggcttcagcagacacaacagcagcaacagacagcagctttggtccgg
caactccaacaacagctctccaatacccagccacaacccagtaccaacatattcggacgc
tactga
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integrated database retrieval system
