Sciurus carolinensis (gray squirrel): 124972167
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Entry
124972167 CDS
T08117
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124972167
04121 Ubiquitin system [BR:
ncar04121
]
124972167
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124972167
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124972167
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
TRAM_2
Motif
Other DBs
NCBI-GeneID:
124972167
NCBI-ProteinID:
XP_047392374
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All DBs
Position
X:complement(1241542..1249664)
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AA seq
694 aa
AA seq
DB search
MEAKVLESAQADLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPEEFCEFIKSNTEQMREAFATAFSKLKPEASPPPPPPPPPPAAQDALAK
GGPGLEGRRQQELTGAVLALLCEGLFPASVVDEPTFRALLRAAEPRYELPSGKFFSSRAL
PEKYGAVRDAVRKELADAAWCGVSAELWRSETQNRAYVTLAAHFLGLASPNCLSLASRCL
KTFEVPEENTAETITRVLYETFIQWGVSAKVAGATTDCGKDIAKACSLLDIPVQMPCLGR
TFNAGIQQAFRLPKLSALLARCRRLVEYVQQSAAAMYMLCQKQKQLGAPHAMLVSDRVAW
WGSTLAMLRRLQEQQFAIAGVLVEDSNNHHLMLEASEWATIEGLVDLLRPFKQVAEMLSG
SRYPTISMVKPLLHMLLNTTLTVKETDSKEISMAKEVIAKELARTYQDAPEIDMFLNVAT
FLDPRYKRLPFLSAFERQQVENRVVEEAKGVLEKVKDSGFAPPPAEEKIYPAPEEPPAKK
PVPSAPAPASVINSMLAEIFCQGGCAEDREEWHAQVVEELSNFKSQKVLGLQEDPLKWWS
DRLALFPVLPKVLQKYWCVAATRVGPERLFGSAANVVRAKRNRLAPAHVDQQVFLYENAR
RAGEAEPEDEDEGEWGLDQEQLFPLLGLRDGGFL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaggctaaagtcctggagagcgcacaggccgacctgaagctcgtggcccacccgcgc
gccaagagcaaagtgtggaagtacttcggcttcgacaccaacgccgagggatgcatcctg
cagtggaagaagatctactgccgcatctgcatggcccagatcgcctactcgggcaacacc
tccaacctgtcctaccacctggagaagaaccaccccgaggagttctgtgagttcatcaag
agcaacaccgagcagatgcgggaggccttcgccaccgccttctccaagctcaagcccgag
gcctcgccgccgccgccgccgccgccgcccccgcccgcggcgcaggacgcgctggccaag
ggcggcccgggcctggagggccgcaggcagcaggagctcacgggcgccgtgctggcgctg
ctctgcgaggggctcttccccgcctccgtcgtggacgagcccaccttccgcgcgctgctc
agggcggccgagccgcgctacgagctgcccagcggcaagttcttctccagcagggcgctg
cccgagaagtacggcgccgtgcgcgacgccgtgcgcaaggagctggccgacgccgcctgg
tgcggcgtctccgccgagctgtggcgcagcgagacccagaaccgcgcctacgtgacgctg
gccgcccacttcctgggcctggcgtcccccaactgcctgtcgctggcctcccggtgcctg
aagaccttcgaggtgcccgaggagaacacggcggagaccatcacgcgcgtgctctacgag
accttcatccagtggggcgtcagcgccaaggtggccggggccaccaccgactgcggcaaa
gacatcgccaaggcctgctccctgctggacatccccgtgcagatgccgtgtctggggcga
accttcaacgcgggcatccagcaggccttccggctgcccaagctgagcgcgctgctggcg
cgctgccgccggctggtggagtacgtgcagcagtcggcggcggccatgtacatgctgtgc
cagaagcagaagcagctgggcgcccctcacgccatgctggtcagcgaccgtgtggcctgg
tggggcagcaccctggccatgctgcggcggctgcaggagcagcagttcgccatcgcgggc
gtcctggtggaggacagcaacaaccaccacctgatgctggaggccagcgagtgggccacc
atcgagggcctggtggatctgctgcggcccttcaagcaagtggccgagatgctgtccggc
tccaggtacccgaccatcagcatggtgaagccgctgctgcacatgctgctcaacaccacg
ctcaccgtcaaggagaccgactccaaggagatcagcatggccaaggaggtcatcgccaaa
gagctggccaggacctaccaggacgcgcccgagatcgacatgttcctgaacgtggccacc
ttcctggacccgcgctacaaaaggctccccttcctgtcggccttcgaacggcagcaggtg
gagaaccgagtggtggaggaggccaagggcgtcctggaaaaggtcaaggacagcggcttc
gcgccgccgcccgccgaggagaagatctacccggcgcccgaggagcctccggccaagaag
ccggtgcccagcgcgcccgcgccggccagcgtcatcaacagcatgctggccgagatcttc
tgccagggcggctgcgccgaggaccgggaggagtggcacgcgcaggtggtggaggagctg
agcaacttcaagtcgcagaaggtgctgggcctccaggaagacccgctcaagtggtggtcg
gaccgcctggcgctcttcccggtgctgcccaaggtgctgcagaagtactggtgcgtggcc
gccacgcgcgtcggccccgagcgcctcttcggctcggcggccaacgtggtccgcgccaag
aggaaccggctggcgcctgcgcacgtggaccagcaggtcttcctctacgagaacgccagg
cgcgcgggcgaggccgagcccgaggacgaggacgagggcgagtggggcctggaccaggag
cagctcttccccctcctcgggctgcgggacgggggcttcctgtag
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