Sciurus carolinensis (gray squirrel): 124972202
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Entry
124972202 CDS
T08117
Name
(RefSeq) uncharacterized protein LOC124972202 isoform X1
KO
K24929
tetratricopeptide repeat protein 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124972202
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
124972202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_17
TPR_16
TPR_9
TPR_14
TPR_12
TPR_19
ARM_TT21_N
TPR_CcmH_CycH
TPR_6
ANAPC3
NatA_aux_su
ARM_TT21_5th
ARM_TT21_4th
MIT
Motif
Other DBs
NCBI-GeneID:
124972202
NCBI-ProteinID:
XP_047392421
LinkDB
All DBs
Position
2:139045342..139194725
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AA seq
1434 aa
AA seq
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MGSLEKNQKSPSRILQASFSPHMHDLCTTTPGRELPIDLHLASRVYHTANKKGHSNLLEF
FGSCFLDDHFIDTEKDRILYGIPVRRENEDYVSVPLVPPGTPCEWAQGTRQYAHKPYLSL
LGEETSAYPELTKMFWNPTAPKFSVPESVMRDTLYPKYESVQTSRILTEKILSESEECIT
LDNNRISKPFLLRKSASFDNIPKRCSTQPIQLKRAKSAVELRKKFTTKSLEIKDDIGRNL
RVLMFQKRRALELQLAEQNKAEMHPSTRASIDEHLESTQDKSHFEDVSLSLVEASKKAGV
TYIIYPKKKKMKWKKKLKMLKLTSVYKELAKAPKTIQRSSSHGILPGEKKYFLRVPLYER
QLRCPSLPLKLDFDKFVESKGGIPRNTDFRTWVADIFIKDKLPKKSPPDVKTSIEKELPE
KVEEPPKLKLSDFLGCDLPSKVIEHCKSEVETLTEQINNKKMLPAVAYCRRGAIYRHLGM
LQSSMSDLQEAILLEPMLLNAFWHRHFIYLFQDRINDALDDLNYINKYNKNNADAYLSKA
EIFRKKENIALAILNYTQAIKCRPTDADSYFRRGEMHENANRVLAIDDFSKCIFHDPQRV
DALLKRGMFYYENENWISAIQDFTTLLDIEPKNLQARVHRGRANFKRHLYKQATEDFSIA
VHLDPNNWLSFYYRACLFRKTNPLKALQDYSISVLLNDGHENFSCFLHRGIVYVHLKLWW
LAICDFETVITLERTVTLAYINIGLIYLLHLNNCNEAIWWFSEAIKINPLCIQSYICRAE
GYYKLHKLKRAVKELSRAIHFQPDGLQLYIIRGQYLLMMKKYDLAKFTIYQVAEMNRGLI
ELSPVQQAIIYSFCENHEKAIQVLEEALCNRPETIMLMILAKTQMKAKNIKEAMRLYMKA
LEVFSYSPKGPNTATLSSDCLYNLGLCYMEENNFHMAFDSFTKAVKANPDFAEAFYQRGL
CKVKLQKESSILDFNRAITLDPKHYQAYLARVAFYGSKGRFSKAILNCNEAINIYPESVH
AYLCRGVLKYYSRNYKLAIEDLTTVINMDKKCYVAFYNRALCYTQTRELQMALTDYGIVL
LLEAVESLTLNALINRGNIYAEQEQYGFALEDFKQAALISQTNLSLFHAAAMCHHRIKEF
EDAVNFFAWALKLNPRFLDALVGRGNSYMEYGNDEATKQAQKDFLKALHFNPLYAKARIS
LGYNLQAQGKFQKAWNHFTIAIEVDPKNYLAYEGRAVVCLQMGNNFAAMQDINAAIKINT
TAEFITNRGVIHEFMGQKQNAMKDYQAAIALDPKYSLAYFNAGNIYLHHRQFSQAGDYFS
KALKFDPEDDYALMNQAITNTILKKYEEAKENFACAVEHCPLWAAVYFNRAHLYHSLQQY
ELAEEELSKALSLTPNDALAYNFRAEVRGKIGLIEEAMADYNQALDLEECASDT
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcctggaaaaaaatcaaaagtccccaagcagaattctacaggcctccttcagt
cctcacatgcatgatctgtgtaccaccaccccaggccgggagctgcccattgacctgcac
ctggcctcccgtgtgtaccacactgccaacaagaagggccacagtaacctacttgaattt
tttgggtcatgtttcttagatgatcacttcatagatacagaaaaagatagaatactgtat
ggaattcctgttaggagagaaaatgaagactatgtcagtgtccctctggtaccaccgggg
acaccctgtgaatgggcacaaggaactaggcaatatgctcacaagccatacctgtcactc
ttgggagaggaaacatctgcttatccagaacttacaaagatgttttggaatcccactgcg
cccaaattctctgttccagaatctgtcatgagggacactctatatccaaaatatgagagt
gttcaaacaagcagaattttaactgagaaaattttgtctgaaagcgaggagtgtatcact
ttagataataacagaataagtaagcctttcttactcagaaaatctgcatcatttgacaat
atcccaaaacgttgcagtacacaacctatacaattgaagagagcaaaatctgcagttgaa
ttgagaaagaagttcaccaccaaatcattagaaatcaaggatgacattggaagaaatctg
agagtgttgatgttccagaaaagaagggccctggagctccagctcgctgagcaaaataag
gcagagatgcacccctctacgagagcaagtatagatgaacacttggagagtactcaggac
aagagccattttgaagatgtgtctctctctctcgttgaagcatcgaaaaaagctggtgtt
acttacattatttatcccaagaaaaagaagatgaaatggaagaaaaaactgaaaatgctt
aagcttaccagtgtgtataaagagttagccaaggctcccaaaaccattcaaagatcatca
tctcatggaatacttcctggagaaaagaaatattttctcagagttccattatatgaacgt
caattacggtgtcccagcttacctttgaagttagattttgataaatttgtggaaagtaag
ggaggaataccaagaaatactgattttcggacatgggttgctgatatattcattaaagat
aagcttccaaaaaaatccccaccagacgttaaaacttctattgaaaaggagcttcctgaa
aaagttgaagaaccaccaaaactaaaattaagtgattttttgggatgtgatcttccatca
aaggtcattgagcattgtaaatctgaagtggaaaccttgactgagcaaataaataataag
aagatgcttcctgcagttgcatattgcaggcgtggagctatttataggcatctgggaatg
ttacagagttccatgagtgatttacaggaagctatacttttggagccaatgcttctcaat
gccttttggcaccgacatttcatttatcttttccaagacagaattaatgatgctttggat
gatttgaattatataaataaatacaataaaaataatgcagatgcttatttgtcaaaggcg
gaaattttcaggaaaaaagaaaacatcgctttggcaattctaaattacacccaggcaatt
aagtgcaggcccacagatgctgatagctatttcaggaggggtgagatgcatgaaaacgca
aacagagtactggccattgatgacttttctaaatgtatttttcatgatccccaaagagta
gatgcattgttgaaacgtggaatgttttactatgaaaatgaaaattggatttcagccata
caggattttacaactttgttagatatagagcccaaaaatttgcaagcaagggtacatcga
gggagagcaaattttaaaaggcacctttataaacaagcaactgaggacttttctattgca
gttcacttagatcctaataactggttatcattctattatcgagcttgcttatttagaaag
actaaccctctaaaagcactacaggattatagcatttcagttctcttaaatgacggccat
gagaattttagttgttttctacatcggggcatagtgtatgtacatctaaaactttggtgg
ctggcgatttgtgactttgaaactgttattactctagaaagaactgttactttggcttat
ataaacattggtctcatatatctgctacacctaaacaactgcaatgaagccatttggtgg
ttttctgaggctattaaaatcaatcctttgtgtattcaaagctatatttgtagagcagaa
ggctattataagctgcataaattgaaaagggcagtcaaggagttatctcgtgccatccac
tttcagccagatggactccaattatatataataagaggacaatatcttcttatgatgaaa
aaatatgatctggcaaagttcactatttatcaagtagcagaaatgaaccgtggtctcatt
gaattgagtccagtacagcaagcaatcatttattcattttgtgaaaaccatgagaaggcc
attcaggtcttggaagaggccttgtgcaataggccagaaacaatcatgcttatgatatta
gcaaaaacacaaatgaaggccaagaacatcaaggaagctatgagactgtatatgaaggca
ttggaagtcttttcttattctccaaaaggaccaaatactgcaactctttcatcagactgt
ctgtataacttgggtctttgttacatggaagaaaacaacttccacatggcttttgattct
tttacaaaagctgtgaaagcaaatcctgattttgcagaagctttttatcaacgtgggctt
tgtaaagtaaaactccaaaaggagagctcgattctggactttaatcgtgcaattaccctc
gatccaaaacactaccaggcatacttagcccgagtagccttctatggttcaaaaggcaga
ttctccaaagcaattctgaactgtaatgaggccatcaatatttatcctgagagtgtgcac
gcctatctctgcagaggagttctgaaatactacagcaggaattacaagttagctattgaa
gatttaactacagttatcaacatggacaaaaagtgttatgtggcattttataacagagca
ttatgttacacccagacaagggaacttcaaatggccttaacagattatggaattgtgctg
ctgcttgaagctgtagaaagtctaacattaaatgctctcattaatcgtggaaacatctat
gctgagcaagagcagtatggctttgcattagaggattttaaacaagctgcactgataagc
cagaccaacctgagtctttttcatgctgccgccatgtgccaccacagaattaaagagttt
gaagatgctgtcaatttcttcgcctgggctcttaaacttaacccacgttttctggatgct
ctcgttggacgcgggaattcctacatggaatatggaaatgatgaagccaccaagcaagca
cagaaggattttctgaaagcattgcattttaatccattatatgcaaaagccagaattagt
ctaggctataatttgcaggcccaaggaaaattccagaaagcttggaatcattttactatt
gccatagaagttgatccaaagaactacctggcctatgaaggaagagctgtggtctgtctt
cagatgggtaataattttgctgcaatgcaggatattaatgctgccataaagatcaatacc
acagcagagttcataacaaatcgtggtgtgattcatgagtttatgggccaaaaacagaat
gcaatgaaagactaccaagcagcaattgctttagaccccaagtactcactggcttacttt
aatgccggaaatatctacttacaccacaggcagttttctcaggctggtgactacttctca
aaggctttaaagtttgatccagaagatgattatgctctcatgaatcaagctatcacaaat
acaatattgaaaaaatatgaagaagcaaaagaaaattttgcatgtgcagttgaacactgt
ccactttgggctgcagtatatttcaacagagcacatttataccacagtttacagcagtat
gagctagctgaggaagaattaagtaaagctctgtctttgactcctaatgatgctctagcg
tataacttcagagctgaagttcgtggtaaaataggtctgattgaggaagctatggccgac
tataaccaagcacttgatcttgaagaatgtgcctcagatacatga
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