Sciurus carolinensis (gray squirrel): 124972278
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Entry
124972278 CDS
T08117
Name
(RefSeq) transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124972278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124972278
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124972278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
124972278
NCBI-ProteinID:
XP_047392506
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Position
X:complement(16285740..16288121)
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AA seq
793 aa
AA seq
DB search
MRRSLEQALDRAEDVIENAQQRPPKRKYSSSGEKSLHQKLYDIFVEECQKEPEGTEELRS
NVNLLEKLVERESLPCLVVNLYPENKGYSLMLEDKTGFFSETIQLPYGERELLEYLDAEE
LPPILLDVLEKSELNIFHCGCVIAEIRDYRQCSDMERSTYQSRHILLRPTMQTLACDIES
MTSDDLQWTQEDKLALESELLLATAEPLCLDPSVTVTCTANRLLYNKQKMNTNPMKRCLK
RHSLSSLNLQQELSQHQSPPELRLLTTCKKKREREAGLQHDLRMPAAGYCVDTWRERCCD
LAIPSQVDVEKYAKAKEPVGLDDPQATIWPTPGLDDSGFESEGGSQLWEMKLSFMQSLND
PFFSGKTGPCQEARCEIQMYPPLVSPDVHADGFMARSKTDGGAVNVRQELVQSKVKCAGK
VPHGSSGSARPSQPSPGKKPKQPTARWVRPSVPGKAMKPRALPVTLPPSTGQTLSGNSPP
AQQASSLHKFPPRAPAPKPGGLSQKSPMGVSRGNIVLSPATWPPVRTSEGILSTQGPVGS
TGLKVINVVGPVQGAQVLMNGSSSMLGHSTSTCVPASMYPNGLLLPRGQLPNAQPCPTQP
PAQAGVQLILNNTLGPLTVLQLPPGSLILSPLQQHPQPLQPQPQPLPQPPPQLYQLIPQQ
QLQQPTTALPPQAGPQASVQGSSGQQWALMAQQAVVINLAQGSSVLQPQSAMLCQLGSGQ
QTPGQCLPPQRFQLPAAPQGQLQPQPLPQCLQLRLVQYPMSVATAPTLTVQSHGFRYTGG
QAKDKMKSSTPKF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgatctttagaacaagctttggatcgtgccgaggatgtcattgaaaatgcccaa
cagagaccccctaagagaaaatactcatccagcggggaaaaatctctacatcagaaactt
tatgacatcttcgtagaagaatgtcaaaaggagcccgaggggacggaggaactcaggagc
aatgtcaacttgctggagaagctggtggagagagagtcgttgccatgcttagtggtcaac
ctgtacccagaaaacaagggctattctctgatgctggaggacaaaactgggttcttttca
gagaccatccagctgccttatggggaaagggaactgcttgagtacttggatgcagaagaa
ttaccacctattctgctggatgtcctagagaaatctgagctgaacatttttcattgtggg
tgtgtcatagcagaaatccgtgactacagacagtgcagtgatatggagcggtccacttac
caaagccgacatattctcttgcgtcccaccatgcagactttagcgtgtgatatagagtcc
atgacaagtgatgaccttcaatggactcaggaagacaaacttgcccttgagagcgaactg
ctcttagctacagctgagccactgtgtcttgatccctctgtgacagtcacctgcactgcc
aacaggctactgtataacaagcagaagatgaatactaacccaatgaaacggtgcctgaag
aggcattcattgtcctctctgaatctgcagcaggagctatcccaacatcagtctccacct
gagctaagactattgactacttgcaaaaaaaagagagagagagaagcaggtctgcagcat
gacctaaggatgcctgcagccggatattgtgtggacacgtggagagagagatgctgtgac
ttggccataccttcccaagtggatgtggagaaatatgcaaaagcaaaggagcctgttggg
cttgatgacccacaagcaacaatctggccaacacccgggctagatgattctggatttgaa
agtgaaggtggcagtcagctgtgggaaatgaagctgagcttcatgcagtcactcaatgat
ccatttttctctggcaaaacagggccatgccaagaggccagatgtgagatccagatgtat
cctcccctcgtctccccagatgtccatgcggatggcttcatggctcggtcaaagactgat
ggaggggcagtgaatgtgcgccaggagttggtccagagcaaagtcaagtgtgcaggcaaa
gtgccacatggctccagtggctcagcccgtcccagtcaaccctctccagggaagaagcca
aagcagcctaccgccagatgggtgcgaccctccgtaccagggaaggcgatgaaacctcga
gctctgcctgtgacacttccccccagcacaggacagaccttgtcaggtaacagtcctcct
gcacagcaggcaagcagcctgcacaaattcccacctcgtgccccagctcctaagccaggt
ggcctttctcagaagtcccctatgggtgtcagcagaggaaatatagtgctttctccggcc
acctggccccctgtcaggacctcagaaggaatcctgtccacccagggtcctgtgggctcc
actggcctaaaggtcatcaacgtggtgggcccagtgcaaggagcccaggttttgatgaat
ggttccagctccatgctgggccattccaccagcacctgtgttcctgcgagcatgtatccc
aatggccttctgctccccagaggtcaattgcccaatgcacaaccatgtccaacacagcca
cctgctcaggcaggtgtgcagctgattttaaataatactttgggtcctttaactgtcctc
cagcttccacctggttccctcattttgagtcccctgcagcagcatccccagccactgcag
ccacagccccagcccctgccccagcccccacctcagctttaccagctgattccacagcaa
cagcttcagcaacctacaactgctcttcctccacaggcagggccacaggcttctgtgcaa
ggttcaagtggtcaacagtgggccttgatggcccagcaagctgttgtcattaacctcgct
caaggcagcagtgttctgcagccccagtcagctatgttgtgtcagcttggctctggtcag
caaacacctgggcagtgccttcctccacagagattccagctccctgctgccccacaaggg
cagctccagccccagccactgccacagtgtctacagctgagactggtgcagtaccccatg
tctgtggccacagcacccaccctgacagttcaatcacatgggtttaggtacacaggaggc
caggcaaaagataaaatgaagagtagcaccccaaaattctga
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